Ciona intestinalis (yellow sea squirt): 100187541
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Entry
100187541 CDS
T01056
Name
(RefSeq) dystrophin-like protein 1 isoform X3
KO
K16513
carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100187541
Membrane trafficking [BR:
cin04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
100187541
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
RsgA_GTPase
Shugoshin_N
Motif
Other DBs
NCBI-GeneID:
100187541
NCBI-ProteinID:
XP_002130127
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All DBs
Position
9:4310997..4320091
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AA seq
990 aa
AA seq
DB search
MPSRMSRRKDYNLVDDSYDTRVPLHNEEAFHHGINFKAKYIGTLDVPRPTGRMEIVVAMR
RIRYEFKVKRIKKRKVNVVVSVDGVKVILRTKKKELMWDERKLLLMHDPVYRIFYVSHDS
HDLKIWSYIARDGSSNVFRCNVFKSTKKSQAMRIVRTIGQAFEVCHKFNTAQNAIAPTGK
KATETEQQKIDNKDGKSKKDEVEETDIDAVDITELEPNVGHRTGVTDLDSVQSKQSTPAV
TRATANGLSPSGKISAITGDAPLSLHHQMQLMQQQVLQAEQQTQVAVSQVQLLKDQLSAE
TTARVEAQARNHQLLLQNRELITQMSELVSHISEMEKRISTSRDASNGKYRLHNGERTPA
PIIVDPGTPASAPVHLPSFASKVAKAFPIMNDSLFENMNISSQATPTTNEIGRSGKKTLQ
SAELRLSKSGGNQHNHLESISSDSGSESSSSSEDEEGINPAGYQHVSHSMASTTLATAGS
SGAGKTDIMNLLNLDDTANTSIWTSGLATPSKIHRGHPNTSYPKSNGTDSMLEGSSMFST
SQTNYQTNGYTLSPILSIDRSTTRVKEMDSSIDKTPEKRSAWNRLSSPSNVSHDQTNTSK
KKSEKSDAISPDSTASFNLPRLDPPPKVKRNLSKSTPATPETHFNDSPSASESSWQSVIS
PPPQNTRLKVQSSVGPNEAKTAVKPTEQAKIRYTQPKEVTYLDESISLMEITDSDYTPSI
TSDFDPLSSKRSLFSSTYPSASNPFHPDKVLSSFDQSFDTTAPSKLFDFTPEEYDKHRRY
EPLRKEQSSKWSTGLSYVQDNDSIRSNVKVKHDVSVASSVATISKPSFSETVSEHSINSN
DGDITVGSILDEIDIPANEFTNEFWEGDVTDSLSRTNDAEIAALNDDSKVTNSLESAQTS
KQDVSKTNSDPLEASVVDRTPVLSPVTSPTSLSSGTYNDPANSPARDLNCAKSLPFSGSE
PTSISSSDSGVMSSSTSGNIQDIPNVVHHT
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgccatcacgaatgtccaggaggaaagattataatcttgttgatgattcttatgataca
agagtcccacttcataatgaagaagcttttcaccatgggatcaatttcaaggcaaaatac
attggaacattggacgtacctcggccaacaggacgaatggaaattgttgttgccatgaga
agaataaggtatgagttcaaagtaaagagaataaagaagagaaaagtgaatgtggtagtt
tctgtggatggtgttaaagtgattttacgaacaaagaaaaaagagctgatgtgggatgaa
cgtaagctgctgttaatgcatgatccagtctacaggatcttttatgtatcacatgattcg
catgacttgaaaatatggagttacattgcaagggatggttcaagcaatgtatttcgctgc
aatgtattcaaatcaacaaagaagagccaagcaatgagaattgtaagaaccattggtcaa
gctttcgaagtttgtcataagtttaacacagctcaaaacgctatagcaccaacggggaaa
aaagcaactgaaacagagcaacaaaaaattgacaacaaagatggaaaatcaaagaaagat
gaagtagaagaaactgatatagatgcagttgacatcacagaacttgaacccaatgttggt
caccggacaggggtcacagacttggattcggttcagagcaaacaatccacaccagctgta
acaagagcaacggccaatgggttaagtccttcaggaaaaatatctgccataacaggggat
gcacctttaagtctacaccatcaaatgcagctcatgcagcagcaagttttgcaagctgag
cagcaaacacaagtggcagtttcacaggtgcagctgctaaaagatcagctttcagcggaa
actactgctagagtagaggcacaggcaagaaaccatcagcttctgcttcagaaccgtgaa
ctaattacacaaatgagtgaacttgtctcccacatcagtgagatggaaaagagaatttcc
acctccagagacgcttcaaatggaaagtaccgattacataatggtgaacgtacccctgct
ccaattattgtggaccctgggactcctgcatcagcaccagtccatcttccatcttttgca
tccaaggtagcaaaggcatttcccatcatgaatgattccctcttcgaaaacatgaacatt
tcttcgcaagctactcctactactaatgagattggtcgttctgggaaaaaaacactgcaa
tctgctgagctcagattgtcaaagtctggtggtaatcaacataatcatctggaaagcata
tcatcagattcaggatcagaatcctcaagttcaagtgaagatgaagaaggtattaacccg
gctggttatcaacatgtcagtcattccatggcatcaactacacttgcaacagcaggctcc
agtggagcaggcaaaactgatataatgaacttgttaaatctggatgataccgccaacacc
tcaatatggacatccggactagccacaccatctaagatacatcgagggcatccgaacaca
agctaccccaagtcaaatggcactgacagcatgctggaagggtcatctatgttttcaacg
tcacaaactaactatcaaacaaatggatatacactttcccccattctcagcattgatcga
tccacaaccagagtaaaagaaatggattcaagcattgataagactcctgaaaagagaagt
gcatggaatcgcttgtcatcaccaagtaatgtctcccacgatcaaactaatacttccaag
aagaagagtgaaaaaagtgatgcaatctcaccagactcaacagcctcgttcaatttacca
cgacttgatcccccaccaaaggtgaagcgaaacctgtcaaaatcaacccccgccacccca
gaaactcacttcaatgactctccttctgcctcagaatcatcatggcaatcagtgatcagt
ccaccaccacagaacacaagattaaaagttcagtcctcagtcggaccaaacgaagctaaa
actgctgtaaaaccaacagaacaggcaaaaattcgatacacacagcctaaagaagtcact
tatttggatgaatcaatttccctgatggaaattacagattcagattacacaccgtctata
acaagtgactttgacccattaagcagtaaacgttcactcttttcctctacctatcccagt
gcatcaaaccctttccacccagacaaagttctctcatcatttgatcaaagttttgacacc
actgccccgagcaagctgtttgattttacgccagaagagtatgacaaacatagacggtac
gaaccgctgagaaaggagcagtcatccaagtggagcacgggcctgtcatatgttcaagac
aacgacagcattcggtcgaatgttaaagtaaaacatgatgtttctgtagcgtcgtctgta
gcgacaatttccaagccttccttttccgagactgtatcggagcattccattaacagtaac
gacggggacataacagttggctcgatactcgacgagattgatattcccgcaaatgagttt
acaaacgagttctgggaaggtgacgtcacagactctctttcccgaaccaacgatgccgaa
atagcagctctcaatgacgacagcaaagtaacgaacagtttagaatcagctcaaacaagt
aagcaagacgtttccaaaacaaacagtgatccgctagaggcatccgtggttgacagaacc
ccagttttatcaccagtgacgtcacctacctcgcttagcagtggtacgtataacgatcct
gcaaactctcctgcacgggatttaaactgtgcgaagtcattaccgttcagtggaagcgag
ccgacttctatttcgtcaagtgactcaggcgttatgtcaagttcaacaagtggaaacatc
caggacattccaaacgtagtacatcatacgtga
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