Ciona intestinalis (yellow sea squirt): 100187543
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Entry
100187543 CDS
T01056
Name
(RefSeq) tubulin alpha chain, testis-specific
KO
K07374
tubulin alpha
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04145
Phagosome
cin04517
IgSF CAM signaling
cin04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100187543
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100187543
09142 Cell motility
04814 Motor proteins
100187543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100187543
03036 Chromosome and associated proteins [BR:
cin03036
]
100187543
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100187543
04147 Exosome [BR:
cin04147
]
100187543
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100187543
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
100187543
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
100187543
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100187543
Exosomal proteins of other body fluids (saliva and urine)
100187543
Exosomal proteins of colorectal cancer cells
100187543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
100187543
NCBI-ProteinID:
XP_009861084
Ensembl:
ENSCING00000008913
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRIIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEGEAEEGEDEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctcaatccacgttggtcaagctggtgtccaaatcggcaatgcttgt
tgggagttgtattgcttagagcacggcatccaacccgatggtcagatgccaagtgacaag
acaattggagggggtgacgattcgttcaacactttcttcagtgagacaggagcaggaaaa
catgttccaagagcagttttcgtcgatctggaaccgacggttgttgatgaggttcgtact
ggaacctacaggcaacttttccatcctgaacaactgattacaggaaaggaagatgccgcc
aataactacgcaagaggccactacaccattggcaaagaaatcgtcgatcttgttcttgac
cgaattcgaaaactagcggaccaatgtactggtctacaaggttttcttattttccattca
ttcggtggaggaactggttcaggatttgcttcgttgctcatggaaagattatccgttgac
tacggaaagaaatccaaacttgagttcgcagtttacccggcacctcaggtatcaaccgca
gtggtggagccttacaactcgatcctgaccactcacaccactcttgagcattccgactgc
gcctttatggtcgacaatgaagctatttatgatatttgtcgccgaaatctcgatattgag
cgtccaacttacaccaatttaaatagaataatcggtcaaatcgtgtcctccatcaccgcc
tcccttcgattcgatggcgcgcttaacgtcgatttgaccgaatttcaaaccaacttggtg
ccatatccacgtattcatttcccattggtcacgtatgctccagttatctctgctgagaaa
gcttaccacgagcaattatcagtagctgagatcaccaacgcgtgctttgaaccagccaat
cagatggtgaaatgcgacccacgtcatgggaagtacatggcatgctgcatgttgtaccgc
ggtgatgttgtcccgaaggatgtgaacgctgctattgctacaattaaaaccaaacgaacc
atccagttcgtcgattggtgtccaactggcttcaaagttggtatcaactaccaaccaccc
accgttgtaccaggtggtgatttggcaaaagttcaacgagcggtttgcatgttgagcaac
acaacagctattgccgaagcttgggctcgtcttgaccacaagttcgacttgatgtacgcc
aagcgtgcattcgttcactggtatgtcggtgaaggaatggaagaaggagaattctccgaa
gctcgcgaggatctcgctgctctcgagaaagattatgaagaagttggagttgattcagtg
gagggtgaagctgaagaaggagaagatgaatattaa
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