Ciona intestinalis (yellow sea squirt): 100187544
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Entry
100187544 CDS
T01056
Name
(RefSeq) proton-coupled amino acid transporter 1 isoform X5
KO
K14209
solute carrier family 36 (proton-coupled amino acid transporter)
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
100187544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100187544
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100187544
Membrane trafficking [BR:
cin04131
]
Autophagy
Other autophagy associated proteins
Others
100187544
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC36: Proton-coupled amino acid transporter
100187544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
100187544
NCBI-ProteinID:
XP_002123949
LinkDB
All DBs
Position
2:complement(4136216..4146042)
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AA seq
517 aa
AA seq
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MVNNQHTPLLNSSDDDNNDNRDSNYNDEEIDVSILDRRHVNPNATSDAATLMHLLKGNIG
TGLLGLPWAIWHAGLVLGPVLLVVMAIVCVHCMHLLVKCSKHFCRKYGVPSMDYSTVMTH
AVRNGPIHSLHKYADKSRYIVDTFLMITQLGFCCVYFVFMGQNIRQVVAHYWQHTPDARV
FMAVICIPIILLSFIRSLKVLAWFSVMANILTVVSLGIIFRFIIPGLTTVNRPLVANVTS
IPMFFGTAVYAFEGIGVILPIENEMRNPEHFPTVLNVGMSLVSTLYLSVGVVGYLQYGPS
ICGSITLNLNNADPLAQSVKILYSCTILIGWLLQMYVPMQLLQPWLQRQSWTRVKEAVIR
FLFTIFTCSCAIAIPNLGDYISLIGAFSSSFLALILPPIIELLTFSSQSEVGDQEPLVEK
VVSKRTTSLSKLQILKNVVIVVFGFSGFVAGTIVSVKAIVKDLSSSDTTSVCNGNDHHMT
IPYTNYTTPSYTTQPYSTPSYFPTSAPAGLLNTTTST
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacaatcagcatacaccgcttcttaattcatcagatgatgataataatgacaac
agggattcgaactataatgacgaagaaatagatgtatcaattcttgataggcggcatgtc
aatcccaatgcaacatctgatgcagccacacttatgcacttactgaaaggcaacattggc
acgggacttcttggacttccgtgggcaatatggcatgctgggcttgtacttggacccgtg
ctcttggttgtgatggcaatagtttgtgtgcattgcatgcaccttctcgttaaatgctct
aagcacttctgcaggaaatatggcgttccatccatggattattctacagtcatgacacat
gctgtgagaaacggacccatccactccttgcataaatatgctgacaaatctcgttacata
gttgacacttttcttatgatcacgcaactgggcttctgttgtgtgtattttgtattcatg
ggtcaaaatatacggcaggtagttgcacattactggcaacacacaccggatgcacgtgtt
tttatggcagttatttgtattcccatcatattactatcattcataagatctctaaaagtt
ctggcatggttttcagtgatggctaatatccttacagtggtgtcacttggaatcatattt
aggtttattataccggggcttaccactgttaacagaccattggtagcaaatgtaacttcc
attccaatgttctttggaactgctgtatatgcttttgaaggaattggagtgattcttcca
attgagaacgaaatgcgcaacccagagcatttccctacagtactgaatgttgggatgtca
cttgtatccaccctctacctttcagttggggtggtgggctatttacagtacggaccttca
atttgtggcagcatcactctcaatttgaacaacgcagacccccttgctcaatcggtgaaa
attctttactcgtgtacgatacttattggctggctgctgcagatgtatgtaccaatgcag
cttctccaaccatggctgcagaggcagtcatggacaagagtgaaggaggcagttatcagg
ttcctattcaccatattcacctgttcttgtgcaatagcaattccaaacttgggtgactac
atctcgcttatcggggcattctcgtcctccttccttgctcttattttacccccaataatt
gaacttctcacgttttcaagccaatcagaagtgggagatcaagaaccattggtggaaaaa
gttgtttcaaaaagaacaacctctctttcgaaacttcaaatcttaaaaaacgttgtcatc
gttgttttcggcttctctggctttgttgccggcaccattgtctcggtgaaagcaatagta
aaggatctcagcagcagtgacaccaccagtgtttgcaatggcaatgaccaccatatgacc
ataccctacacaaactacacaacgccttcctataccacccagccttacagcacaccatcc
tactttccaacatccgcaccagctggcttactgaacactaccacttctacttaa
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