KEGG   Ciona intestinalis (yellow sea squirt): 101241932
Entry
101241932         CDS       T01056                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-5-like
  KO
K10612  cullin 5
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101241932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cin04121]
    101241932
   03400 DNA repair and recombination proteins [BR:cin03400]
    101241932
Ubiquitin system [BR:cin04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     101241932
DNA repair and recombination proteins [BR:cin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     101241932
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8
Other DBs
NCBI-GeneID: 101241932
NCBI-ProteinID: XP_009860469
LinkDB
Position
12:2294934..2307218
AA seq 768 aa
MSMLVGNQQTFDEKWPTMQPIILKLLSQQSVTRQEWQDLFWDVHSVCLWDNQVGPEKVHT
ALKTNISNFIKEAQQRIKTHHDGNALLRAYIVEWRKFFDQCVYLPEPFTQLEKSLSGXPS
KKKKQEQNTIVRKLMLDSWNKNIFKDIYEQLKDRTMELIKHEREGGELDAQLVIGVRQSF
VNLCSNPDDPLEIYREHFENAYIASTEEHYKSEAETYLAEHGVRKYMKYAYQKLLEESQR
GTRYLESSSQTRLNARCVKVLATQFSEAILAECKLMIRENEMDRLYLMFNLMNRVPNGID
PMLECLQEYIVQQGLADMKECCDIITTDSEKYIDLLLSLFNRFSDLVKKSFDDDPRFLTA
RDKAFECVVNDYSVFNVELQTRSKQNPIKLPPESRCPELLANFCDMLLRKTPLSKKLSSE
EVDAKLKDVLLVLKYVSNKDVFMRYHKAHLTRRLILGTSADSEKEENMVEGLREVGMPAD
FVNKLARMFQDIKVSEDLNTQFKEAREDRSSELANIKILNAGAWSRRSDRIPVSLPAILE
DLIPDVEEFYKSKHHGRMLNWNHLMSNGVMTFKTEVGSYDIEVTTFQMSVLHIWNSRPTE
SISFESLRLATQLPDTELRKTLWSLVANPKLKRQVLLCEPKLSSPKEFQESSMLAVNHQF
AVMKAGKPQKRGRVNLIGRLQLSTDKSREEDNEGITQLRILRTQEAIVKILKMRKRINNA
QLQTELVEILKNLFLPQKKLIKQQIEWLIENKYMKRDDDDINTFIYIT
NT seq 2307 nt   +upstreamnt  +downstreamnt
atgtcgatgctcgtgggaaatcaacaaacttttgatgaaaaatggccgactatgcaacct
attatactcaaattgctgagtcagcaatcagtgactcgacaggaatggcaggatttattt
tgggacgttcattcagtttgtttgtgggacaaccaagttggacctgaaaaagttcacact
gcgcttaaaacgaatatttcaaactttatcaaagaagcacagcagagaataaaaactcac
catgatggtaatgcattgctgcgtgcttatattgtggagtggcgaaagttctttgaccaa
tgcgtatacttgcctgaaccttttactcaacttgagaagtcactcagtggancaccgtcg
aaaaagaagaaacaagaacaaaacactattgttagaaagctgatgctagacagctggaac
aagaatattttcaaggacatctatgagcaactgaaagatcggacaatggagttaatcaag
catgaaagggaaggaggggaacttgatgcacaacttgtgattggagttcggcaatctttt
gtaaacctttgttccaacccggacgaccctcttgaaatttatcgggaacattttgagaac
gcttacattgcttcaactgaagagcattataagtcagaggccgagacttacttggctgaa
catggcgtacggaagtatatgaaatatgcataccagaaacttctggaagaatcacaaaga
ggaactcggtacctcgaatcttcgtcacaaacacgattaaacgctcgttgtgttaaagtt
ttagccactcaattcagtgaagctattcttgcagagtgtaaacttatgatacgcgaaaat
gaaatggaccgtctctacctcatgttcaacttaatgaaccgagtaccgaatggaatcgat
ccaatgttagaatgcttgcaagaatacatcgttcaacaagggcttgctgatatgaaggaa
tgttgcgatattattactacggactctgagaaatacattgatcttcttctttctctcttc
aatcgtttctcggacttggtgaagaagtcgttcgatgatgaccccaggtttttaacggca
agggacaaagcgtttgaatgtgtggtgaatgattactcagtttttaacgtggagttgcaa
acacgatccaaacaaaatccaataaagctcccacccgaatcccgatgtccggaacttctt
gcaaacttctgtgacatgctgttgagaaaaactcctctgagtaaaaaactctcatcggaa
gaagttgacgcgaaacttaaagacgtgttgttggtgttaaagtatgtttccaacaaagat
gttttcatgagatatcataaagctcatcttacaaggaggctcatcctcggtacatctgct
gatagtgaaaaagaggaaaatatggtggaggggttacgtgaggttggaatgcctgcggat
tttgtgaacaaactcgcacggatgttccaggatatcaaagtaagcgaggacctcaacacg
cagttcaaggaggcacgggaggatagaagctcggagctcgcaaacatcaagatcctcaat
gcgggagcttggtctcggaggtcggatcggatccctgtctccctccctgcgatcctggag
gaccttattccggatgttgaggagttttataagagcaagcaccatgggaggatgcttaac
tggaatcatctgatgtccaatggagttatgacctttaaaacagaggtcgggtcatatgac
atcgaggtcacgacctttcaaatgtcagtgttgcacatctggaattctcggccaacagaa
tcgatttcatttgagagtttacgtctggcaacacagttacctgacactgagttacggaaa
actttgtggtcacttgtagcgaacccaaagttgaaacgacaggttttactttgtgaacca
aagctatcgtctcctaaagaattccaggagagctccatgctcgctgtcaaccatcagttt
gctgttatgaaagccggcaagcctcaaaagcgtggacgagtgaatctgattggtcgattg
caactttcaaccgacaaatcacgtgaggaggataatgaggggattacccaacttcggatt
cttagaacacaagaggccattgtgaagatcttaaagatgagaaaacgaatcaacaacgca
caactccaaacagagttagttgaaatcctcaaaaatcttttcctgcctcaaaaaaagctg
atcaaacaacaaatcgaatggcttattgagaacaagtacatgaagcgcgatgatgacgac
ataaacacgtttatctacatcacataa

DBGET integrated database retrieval system