Ciona intestinalis (yellow sea squirt): 101242185
Help
Entry
101242185 CDS
T01056
Name
(RefSeq) solute carrier family 22 member 5-like
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
101242185
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
101242185
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
101242185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
Motif
Other DBs
NCBI-GeneID:
101242185
NCBI-ProteinID:
XP_004226222
Ensembl:
ENSCING00000011886
LinkDB
All DBs
Position
7:4174453..4180562
Genome browser
AA seq
563 aa
AA seq
DB search
MESNEYDTENKSKKKLSYYNKRLLLLLLFSSISNPYIMLQSVVLHYQPPLHCDISEIQEN
LNNLNKSHLNATVPWIEDSNGGIVRSSCSMYNVRNKMNISLIQSGKDDAVQCKKFHFEGV
ETSATTEFQLVCENAWVQPLMVSIYFAGNLVVSLFGSYLSDRYGRKPIFLVFTFIQCLSC
VIMSFSESLITYGTMMFLSGGANLINFTTAVILGCEILPQSHRYYVYLFLELGFSIGYLT
VPASAYFLRDWRWFLRFSGMINILYIPYFWWLDESPKWLLATGKIQSAKKVFAKIRKINK
ESHTDTTKSEQIESRKKIEAISTVWNTMREMLKHPSLIWRLVVITSGWAVVNVMYYAIAL
NTNNLTGDRFLNMLYGGIAEIVGVLLYFFVVSKWGCRDCYCAILCIGAVVLAVTPLFALW
NPVVVTISTMFCKLCTSICFNIIFVYTPQLFPTCIRNFATGISSAGGRIGSIISPFVMHA
GGSGSSVVPSIAVAVAALGSTTAVLFRLPAIQTENLPQTVDEALAMKSVFSIPCFKIRDV
TNAVITNDEQNDQDNQRFLTARI
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaaacgagtatgacactgagaataaatccaaaaagaaactgagttactacaac
aagcgattgcttcttctgcttttattttcgagcatttcaaacccgtatataatgctgcaa
agtgttgttctacactaccaaccacctctgcactgcgacataagcgaaattcaggaaaat
ttaaacaatctgaacaagagtcatcttaatgcaactgtaccgtggattgaagacagtaat
ggtggcattgttagaagctcatgttcgatgtacaatgttagaaataaaatgaatatttca
cttatacagtcaggtaaagatgatgcagtacaatgtaaaaagttccatttcgagggagtt
gaaacatcggccaccacagagtttcaattggtgtgtgaaaacgcgtgggttcagccgttg
atggtttctatttatttcgccggcaatctcgtcgtttcattattcggcagttatttatca
gacaggtatggacgaaaacctatatttctcgtattcaccttcattcaatgcttgtcttgt
gttataatgagcttcagtgagagtctgatcacttatggtacaatgatgtttctttctggc
ggagcaaacctgatcaattttacgacagctgttattctagggtgtgagattttaccccag
agtcaccgatattatgtttatttatttctggagcttggtttttccattggttacttgaca
gtaccagcgagtgcatatttcttgcgtgattggagatggttcttacgcttcagtggaatg
atcaatattctgtacatcccatatttctggtggttggacgagtctccaaagtggcttctt
gctacaggtaaaattcaaagtgcgaaaaaggttttcgcgaaaattagaaaaataaacaaa
gaatcacatactgataccaccaagtctgaacaaattgaaagtaggaaaaaaattgaagca
atttcaaccgtatggaacactatgcgggaaatgttaaaacatccaagcttgatatggaga
ctggtggtaataacatctggatgggctgttgtgaatgttatgtattatgcaatagcgctg
aatactaacaatcttactggtgatcgcttcctgaatatgctgtacggtggaatagcagaa
attgtcggggtgttgttatatttcttcgttgtttccaaatggggatgcagagactgctac
tgcgcaatcttgtgtataggagctgttgtacttgcagtaacaccactgttcgcactatgg
aatccagtcgtcgttacaatatcgaccatgttttgtaaactatgcacatcaatctgcttt
aacattatctttgtttacacaccacaactcttccccacatgcattcgcaactttgctacc
ggtatttcatcggcgggtggtagaatcgggagtattatatctccatttgttatgcatgca
ggtggatcagggagttctgttgtgccttccattgcagtggccgtcgctgctttgggctca
acaacggctgtgttgtttagacttcctgcgattcaaaccgaaaatttgcctcaaaccgtt
gacgaagcgcttgctatgaaaagtgtcttcagtataccctgcttcaaaataagagacgtc
acaaatgctgttattacaaatgacgaacaaaatgatcaagataatcaacgatttctgact
gcacggatttaa
DBGET
integrated database retrieval system
