Ciona intestinalis (yellow sea squirt): 101242292
Help
Entry
101242292 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC101242292
Organism
cin
Ciona intestinalis (yellow sea squirt)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pacifastin_I
Motif
Other DBs
NCBI-GeneID:
101242292
NCBI-ProteinID:
XP_018672281
LinkDB
All DBs
Position
Unknown
AA seq
1675 aa
AA seq
DB search
MSDDDSAQDVAFGSKADQLAAGQGLAQGAADSDIYVGDKDYGGDVSKTMFVPGSIALGAG
ALGKAMGQGHPYGGPGPYYGGAEGYGAAKQGIVIDGGSFITETYDDGASDGVVKAGMGSD
NLAAGQGLAQGAQGADALVAGGKKGGKMSKTVFQPGQTVLGAGVGAGSAYDHAYPHGYFG
GMHGAAGHAAADSGIVIQGGAYETITMSDDDSAQDVAFGSKADQLAAIFGKAASSSKSGL
SAKPKASKGGYSKNQFSLGGLTIGAGVIGGGQSMFDGFSPFTGYPGQSMSSGVADTGLLL
SGDSFKSLLADDSSSSSDIALRSKSSSGAIERALGGTDNALSFISEASICIDASGRERCF
GDSWIDFSDECSSCTCTDVGKISCSVKECPAKPLKKEGFRIVESSKDACCINYMQVPTEC
DTSSCPYTVPTCQIYEELATYSLDDCCSTYECKCNPSLCPKLGSPPCPVGCVRIVMDSDE
CCPVGKCVKNVETDLFAGMEKHINMEPQGLLHSIQTEDDKDASVTLSSKIGSAAQGSAAS
GANSLSALKIITEAAMCIDYQGKERNYGDTWFQHSETCQLCSCADNADVRCETRNCDPYP
VAPEGFVIVEEKADECCYNYRVVAAECEVLNCPYKATICEYYEDLVTYPIDECCCTYECK
CNTAKCSKLGNPTCPHGTERMVIEDDACCPVGKCVEIKLEMEAQADSNVGYAANAMTHRI
EETGGEENGFGLNNYLENNALTHVYGESTQGADALVAGGKVGGKVSKTVFQPGQTVLGAG
AAAGAGHEQAYPYGYFGGKHGAAGHAAADSGIVIQGGAYETITMSDDDSAQDVAFGSKAD
QLAAGQGLAQGAADSDIYVGDKDYGGDVSKTMFVPGSIALGAGALGKAMGQGHPYGGPGP
YYGGAEGYGAAKQGIVIDGGSFITETYDDGASDGVVKAGMGSDNLAAGQGLAQGAQGADA
LVAGGKKGGKVSKTVFQPGQTVLGAGAAAGAGHEQVYPYGYFGGKHGAAGHAAADSGIVI
QGGAYETITMSDDDSAQDVAFGSKADQLAAGQGLAQGAADSDIYVGDKDYGGDVSKTMFV
PGSIALGAGALGKVMGQGHPYGGPGPYYGGAEGYGAAKQGIVIDGGSFITETYDDGASDG
VVKAGMGSDYLAAGQGLAQGAQGADALVAGGKKGGKVSKTVFQPGQTVLGAGAAAGAGHE
QAYPYGYFGGKHGAAGHAAADSGIVIQGGAYETITMSDDDSAQDVAFGSKADQLAAGQGL
AQGAADSDIYVGDKDYGGDVSKTMFVPGSIALGAGALGKAMGQGHPYGGPGPYYGGAESY
GAAKQGIVIDGGSFITETYDDGASDGVVKAGMGSDNLAAGQGLAQGAQGADALVAGGKKG
GKVSKTVFQPGQTVLGAGAAAGAGHEQAYPYGYFGGKHGAAGHAAADSGIVIQGGAYETI
TMSDDDSAQDVAFGSKADQLAAGQGLAQGAADSDIYVGDKDYGGDVSKTMFVPGSIALGA
GALGKAMEQGHPYGGPGPYYGGAEGYGAAMQGIVIDGGSFITETYDDGASDGVVKAGMGS
DNLAAGQGLAQGAQGADALVAGGKKGGKVSKTVFQPGQTVLGAGAAAGAGHEQAYPYGYF
GGKHGAAGHAAADSGIVIQGGAYETITMSDDDSAQDVAFGSKADQLAAGQGLAQG
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacgattcagcacaagacgtcgctttcggttctaaggccgatcaattggcc
gcaggacaaggcttggcgcaaggagcagctgattcggacatctacgtcggagacaaggac
tacggcggcgatgtgagcaagaccatgttcgttcctggatccattgcactcggcgcggga
gcactcggaaaggcaatgggacagggacatccttatggtggacccggaccatattacgga
ggcgcggaaggttacggtgcagccaagcagggcatcgtcatcgatggcggctcattcatc
actgaaacctacgacgatggagcatcggacggagtcgtaaaggctggcatgggatccgac
aacttggctgcaggccaaggcctcgcccaaggcgctcaaggcgccgacgctctcgttgct
ggaggcaagaagggcggcaagatgagcaagaccgtcttccaacctggtcaaaccgtactc
ggcgcaggagttggtgctggttcagcttacgatcacgcctacccacatggttactttggc
ggcatgcacggagcagctggacacgcggcagccgactctggcatcgtaatccaaggtggc
gcttacgaaaccatcaccatgtctgacgacgattcagcacaagacgtcgctttcggttcc
aaggccgatcagcttgcagctatttttggcaaagctgcatctagtagtaagtcagggtta
tcagcaaagccaaaagcttctaagggtgggtattctaaaaatcagttctcacttggcggt
ttgaccattggagcaggcgtgataggaggtggtcaaagtatgtttgatggcttttctccg
ttcactggttaccccggccaatccatgtcatctggtgtagctgacacgggattgctgctt
agtggcgattcctttaaatcacttcttgctgacgactcctcctcgtcttctgacattgct
ttaagatcgaaaagttcttctggtgctatagaaagggcgttggggggtaccgataacgct
ctttcgtttatttctgaagccagcatatgcattgatgcttctggtcgtgaacgttgcttc
ggtgattcctggatcgatttcagtgacgaatgtagttcttgcacgtgtaccgacgttggt
aaaattagctgttctgtgaaagagtgtccagccaaaccccttaaaaaagaaggtttccgt
attgttgaaagttcgaaagacgcatgctgcatcaactacatgcaagtccctacagaatgt
gatacatcatcctgtccatataccgtccctacatgtcaaatatatgaagaacttgccact
tactcacttgatgactgctgttcaacatacgagtgcaagtgtaacccctcgttatgtcct
aaacttggcagtccaccatgcccggttggatgtgtccgaattgtaatggattccgacgaa
tgttgtccagttggaaaatgtgtcaagaacgtcgaaactgacttgtttgctggaatggag
aaacatattaacatggagccacaaggcctgttacacagtatccaaaccgaagacgataag
gatgcttctgtcactttaagctccaagatcggttcagcagcacaaggatcagcagcttct
ggagcaaactctcttagtgccctaaagataattacagaagctgccatgtgtatcgactac
caaggaaaagaaagaaactatggtgacacatggtttcagcattctgaaacttgtcaactc
tgctcatgtgccgacaacgctgatgtgagatgtgagaccagaaattgtgacccatacccg
gtagcgcctgaaggattcgttattgttgaagaaaaggcagacgaatgctgttataactac
agagtggttgcggcagagtgcgaagtattgaactgtccgtacaaagcaaccatttgcgaa
tactatgaagacttggtgacgtatccaatagacgagtgttgctgtacatacgaatgcaag
tgcaacacagctaaatgtagcaagttaggaaatcctacttgtccacacggaacagaacga
atggtaattgaagacgacgcatgttgcccggtgggaaaatgcgtagagataaagctggaa
atggaggcacaagccgactccaacgtaggttacgcagcaaatgcaatgacacatagaatt
gaagaaacagggggtgaagagaatggatttggcttgaataattatttggaaaataatgca
ttaacacacgtatatggagaaagtactcaaggcgccgatgctctcgttgctggaggcaag
gtgggcggcaaggtgagcaagaccgtcttccaacctggtcaaaccgtactcggcgcaggt
gccgctgcaggtgcaggccacgaacaagcctacccatacggatactttggcggcaagcac
ggagcagctggacacgcggcagccgactctggcatcgtaatccaaggtggcgcttacgaa
accatcaccatgtctgacgacgattcagcacaagacgtcgctttcggttccaaggccgat
caattggccgcaggacaaggcttggcgcaaggagcagctgattcggacatctacgtcgga
gacaaggactacggcggcgatgtgagcaagaccatgttcgttcctggatccattgcactc
ggcgcgggagcactcggaaaggcaatgggacagggacatccttatggtggacccggacca
tactacggaggcgcggaaggttacggtgccgccaagcagggcatcgtcatcgatggcggc
tcattcatcactgaaacttacgacgatggagcatcggacggagtcgtaaaggctggcatg
ggatccgacaacttggctgcaggccaaggcctcgcccaaggcgctcaaggcgccgacgct
ctcgttgctggaggcaagaagggcggcaaggtgagcaagaccgtcttccaacctggtcaa
accgtactcggcgcaggtgccgctgcaggtgcaggccacgaacaagtctacccatacgga
tactttggcggcaagcacggagcagctggacacgcggcagccgactctggcatcgtaatc
caaggtggcgcttacgaaaccatcaccatgtctgacgacgattcagcacaagacgtcgct
ttcggttccaaggccgatcaattggccgcaggacaaggcttggcgcaaggagcagctgat
tcggacatctacgtcggagacaaggactacggcggcgatgtgagcaagaccatgttcgtt
cctggatccattgcactcggcgcgggagcactcggaaaggtaatgggacagggacatcct
tatggtggacccggaccatactacggaggcgcggaaggttacggtgcagccaagcagggc
atcgtcatcgatggcggctcattcatcactgaaacttacgacgatggagcatcggacgga
gtcgtaaaggctggcatgggatccgactacttggctgcaggccaaggcctcgcccaaggc
gctcaaggcgccgacgctctcgttgctggaggcaagaagggcggcaaggtgagcaagacc
gtcttccaacctggtcaaaccgtactcggcgcaggtgccgctgcaggtgcaggccacgaa
caagcctacccatacggatactttggcggcaagcacggagcagctggacacgcggcagcc
gactctggcatcgtaatccaaggtggcgcttacgaaaccatcaccatgtctgacgacgat
tcagcacaagacgtcgctttcggttccaaggccgatcaattggccgcaggacaaggcttg
gcgcaaggagcagctgattcggacatctacgtcggagacaaggactacggcggcgatgtg
agcaagaccatgttcgttcctggatccattgcactcggcgcgggagcactcggaaaggca
atgggacagggacatccttatggtggacccggaccatactacggaggcgcggaaagttac
ggtgcagccaagcagggcatcgtcatcgatggcggctcattcatcactgaaacttacgac
gatggagcatcggacggagtcgtaaaggctggcatgggatccgacaacttggctgcaggc
caaggcctcgcccaaggcgctcaaggcgccgacgctctcgttgctggaggcaagaagggc
ggcaaggtgagcaagaccgtcttccaacctggtcaaaccgtactcggcgcaggtgccgct
gcaggtgcaggccacgaacaagcctacccatacggatactttggcggcaagcacggagca
gctggacacgcggcagccgactctggcatcgtaatccaaggtggcgcttacgaaacaatc
accatgtctgacgacgattcagcacaagacgtcgctttcggttccaaggccgatcaattg
gccgcaggacaaggcttggcgcaaggagcagctgattcggacatctacgtcggagacaag
gactacggcggcgatgtgagcaagaccatgttcgttcctggatccattgcactcggcgcg
ggagcactcggaaaggcaatggaacagggacatccttatggtggacccggaccatactac
ggaggcgcggaaggttacggagcagccatgcagggcatcgtcatcgatggcggctcattc
atcactgaaacttacgacgatggagcatcggacggagtcgtaaaggctggcatgggatcc
gacaacttggctgcaggccaaggcctcgcccaaggcgctcaaggcgcagacgctctcgtt
gctggaggcaagaagggcggcaaggtgagcaagaccgtcttccaacctggtcaaaccgta
ctcggcgcaggtgccgctgcaggtgcaggccacgaacaagcctacccatacggatacttt
ggcggcaagcacggagcagctggacacgcggcagccgactctggcatcgtaatccaaggt
ggcgcttacgaaaccatcaccatgtctgacgacgattcagcacaagacgtcgctttcggt
tccaaggccgatcaattggccgcaggacaaggcttggcgcaagga
DBGET
integrated database retrieval system
