Ciona intestinalis (yellow sea squirt): 101242695
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Entry
101242695 CDS
T01056
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101242695
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cin04040
]
101242695
Ion channels [BR:
cin04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
101242695
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
PMC2NT
Motif
Other DBs
NCBI-GeneID:
101242695
NCBI-ProteinID:
XP_018669491
Ensembl:
ENSCING00000021134
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Position
11:complement(4487412..4492376)
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AA seq
537 aa
AA seq
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MSYRYIAVMKLLILLVLIVEYAQAVTDPEIPIYEYETQLANKLVHDGKRYSPLSRPVVRF
SDAVVVKFGLGLVQIVELSEKSEVLVTRLWLKMEWKDHDIIWKPQEYGGLDNFRLRTDLI
WTPDIALYNNAESSFNIPLDNLATIYYNGTVTWEGPVLFRTSCFIDVSYFPFDRQNCSLK
LGPWSHSTDQVDMEMALKIPNHPNLGAIDMSRFWKSAEWQLQGTYGVKSSRQYRSTADEY
FTDITYFIVLRRLPLYYAVNVMVPCFQISAITVMVFFLPVGSMEKITLCISVLVALTVFL
ILIIDIVPSTSLVVPLLGQYLLLTTIFVTLSIAVSIITVNMYYRHPKCHPMPPMIRRIFV
EILPKYLFSSSPIKGRLPRKGNSIKRNTSYKHYYSPVATNPSTNKRYCFGKILERSLARM
HHRDKLETGCMNLHPNGAERLQLSGYYSKHMTHNVMMNTHMDRQLIRINKSIENLIYICE
KQQKEAEEKKLKDEWKLVSSLVDRIFLIVYVIINIGIVVLLIVYRFTDEEFVYPDDV
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacagatatattgcagtcatgaaactgcttattttattggttttaatcgtcgaa
tatgcacaagcagtgacagacccagaaatcccaatatacgaatatgagacacaactggcc
aacaaacttgtccatgatggtaaaagatacagtcctttatcgcggccagtggttcgattt
tctgacgctgttgtggttaagtttggtttggggcttgtgcaaatcgtggaactgtcggag
aaaagtgaagtacttgtaacacgcttgtggttgaagatggaatggaaggaccatgatata
atatggaaaccacaagaatacggtggcctcgacaatttccgacttcgcactgacttgatt
tggactccggatattgctctttataataatgcagaaagttcgtttaatatcccactggat
aacttggctacgatttattacaacgggacagtgacatgggagggccctgtgttgtttcga
acttcatgcttcattgatgtttcttactttccgtttgatcgacagaattgctcgttgaag
cttgggccatggtcacattccacagaccaagtagatatggagatggcgctaaagataccc
aaccacccaaacctgggagcaatcgacatgagtcggttttggaaaagtgcggaatggcaa
ttgcaaggaacgtatggagtgaaaagtagtcgccaatatagaagcaccgcggatgaatat
tttaccgacatcacatacttcattgttctacgtagacttcccctttattacgcagtaaac
gtcatggtgccgtgttttcaaatatcagctattacagttatggtatttttccttcctgtt
ggaagcatggagaaaatcacattatgcatctcagtgctggtcgccctcactgtgtttctt
attctaatcattgatatcgtaccttctacgtcactggtggttccccttttaggacaatat
ctcctgttgacgacaatctttgtaacgctgtccatagccgtgtcaatcataacagtgaac
atgtattaccgtcaccctaagtgtcatcctatgccaccgatgattcgtcgcatctttgtt
gagatattgcccaaatatttattctcaagttctccaataaagggtcgacttcctcgcaaa
ggtaattcaattaaaagaaacacctcatacaaacattattattctcctgtcgcaacgaac
ccttcaaccaacaaacgttattgtttcgggaagattctagaacgttctcttgctcgaatg
catcatcgtgataagcttgaaacaggatgtatgaatcttcaccctaacggggcggagagg
ttgcagttgtctggatactactccaagcatatgacacacaatgttatgatgaatacacac
atggataggcaactaataagaatcaacaagagcatagagaacttaatatacatttgtgaa
aaacaacaaaaagaagcggaagaaaagaaattaaaagacgaatggaagcttgtaagctca
ttggtggatagaatcttccttattgtttacgtcataatcaacattggaatagttgttcta
ctaattgtttatcgattcacggacgaagagtttgtttatcccgatgacgtatag
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