Ciona intestinalis (yellow sea squirt): 101242805
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Entry
101242805 CDS
T01056
Name
(RefSeq) transmembrane and TPR repeat-containing protein 1-like
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
101242805
Glycosyltransferases [BR:
cin01003
]
O-Glycan biosynthesis
O-linked Man type
101242805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_14
TPR_12
TPR_17
TPR_10
TPR_16
ANAPC3
TPR_7
TPR_1
TPR_20
TPR_8
TPR_15
ARM_TT21_5th
PknG_TPR
TPR_CcmH_CycH
Suf
TPR_5
TPR_MalT
TPR_21
HAT_Syf1_CNRKL1_C
DUF1140
SpoU_sub_bind_like
Motif
Other DBs
NCBI-GeneID:
101242805
NCBI-ProteinID:
XP_009857538
Ensembl:
ENSCING00000011634
LinkDB
All DBs
Position
2:complement(428426..432887)
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AA seq
518 aa
AA seq
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MLVLCIAIKLKKSKDHYDSDLRPLVLGTSMLVLPFIPASNLLFPVGFVIAERVLYLPSAG
FIVLLCLAWIKVGVKLPKWKKSLNRMMALLIIFYFIRTMMRNMDWISRKSLFLSGLQTNP
ANPKIRYNWANYLRDSNRSVDAATEYEEVLQLYPGYVAAMNNLATILEETPTTARKAEEL
YVRVIQMRPWHENAYNNLANLLVKRGKYDDAVNVLVRGVRSSTNYMTHAQNLARVLVSRG
KVDKAEQIYKHIVDHFCFKKSKRNCNAQVTGLLQDYGSLLANKGDRRESLKMYKLSFQSN
SSNLESMAKFANALAEAGRVEQATQLITYAVGKNKEHVVDMWKIAATFWKMNKLKESKRL
YEVSVKLHPENLELIGQYAAVLFETGEHAPAVKLLKNLTARDSECQSEGVWRNFASILGR
LGKHDEAIKLLLRCLEGLESVTNNSVSEINVRKGKIKCQLGKHKRDLSILFSRRNKIEEA
NTLWNQSLQDLEEGSSLNPGDKDCPITLKQMTNQNTST
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgctctgcattgcaattaaactaaagaaatcgaaggatcattatgattcagac
ttgcgacctcttgtgttgggaacatctatgttggtgttgccgtttataccagcgtcaaat
ttgctttttcctgttggattcgtcattgcggaacgtgttctttatctacccagtgctggt
ttcatcgttttactatgcctggcatggattaaagtcggagttaaacttccaaaatggaag
aaatctttaaaccgtatgatggcgctgctgatcatcttttattttatacggacaatgatg
agaaacatggattggatttctaggaagtctttatttctttcaggtctacaaacaaaccca
gctaatcccaagatccggtataattgggctaactatctaagagacagcaaccggtcggta
gatgctgctactgagtatgaagaagtacttcaactttatcctggatacgttgcggcaatg
aacaacctcgctactatattggaggaaacgccaactactgcgagaaaggcagaagaatta
tacgtgagagtaattcaaatgcgaccgtggcatgaaaatgcgtacaacaatcttgccaac
ctgcttgtaaaacgtggaaaatatgacgatgcagtcaacgtacttgtgcgtggagttcga
tcttccaccaattacatgacacatgcacaaaacttggcacgcgttcttgtgtcacgagga
aaagtcgacaaagcggaacaaatatacaaacatatagttgaccatttttgtttcaagaaa
tccaaacgaaattgcaatgcccaggtcactggtttattacaagattatgggagtttgctg
gccaataaaggagaccggagagaatcattgaaaatgtataaacttagctttcaatcaaac
tcaagcaacttggaaagtatggcaaagtttgctaacgcattagctgaagcaggacgagtg
gagcaagcaacacaacttattacttatgccgttggaaaaaacaaagaacatgtcgttgat
atgtggaaaattgctgcaacattttggaaaatgaacaaattaaaagagagcaaacgatta
tacgaagtgtctgtgaaactgcacccggaaaacctggaacttattggacaatatgccgca
gttttattcgaaactggagaacacgctccggcagtaaaactgctgaaaaacctgaccgca
agagattccgaatgtcaaagtgaaggcgtgtggagaaactttgcttcaatcctgggaagg
cttggaaaacacgatgaggctataaagttattactccgatgcttggaaggtttggaatca
gttaccaataattctgtgagtgaaataaacgtaaggaaaggaaaaataaaatgtcaactt
ggaaaacacaaacgtgacctttccatcttattttctcgtcgcaataaaatagaagaagca
aacaccctgtggaaccaatctctacaggatttggaagaaggttcgagtctcaaccctggt
gacaaagattgcccaattactctgaaacaaatgacaaaccaaaacacttcaacatga
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