Ciona intestinalis (yellow sea squirt): 101243160
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Entry
101243160 CDS
T01056
Name
(RefSeq) WD repeat-containing protein 60-like
KO
K22869
WD repeat-containing protein 60
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
101243160
Cilium and associated proteins [BR:
cin03037
]
Primary cilia and associated proteins
Dynein and associated proteins
101243160
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_LRRK2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40
WDR55
WD40_RFWD3
EIF3I
CFAP43_N
Acyl-CoA_dh_M
WD40_2
Beta-prop_Vps41
GHMP_kinases_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
101243160
NCBI-ProteinID:
XP_004226364
Ensembl:
ENSCING00000002089
LinkDB
All DBs
Position
8:6255866..6271231
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AA seq
569 aa
AA seq
DB search
MQSNQTTSEHDSASSRSHDMVATTINFSGAKQRSVESKTRKRVLNRRNDLLTLIQLDFNS
FDLFDLAPVTEYNFYIKNFGSQNSGQASTQCNDDAIEIEIQTDQPEVGDRWSQHPPDGAI
ACGGTTVTEDSPHLRMLAAMRDDSNRFSEFLVYASDIIDSSFEEALLWRGNKPNSFTPIT
SCDASTKFNTNIPYLHGRKILHTIFGNGMIAVTFGGACHDVTTRIDQRGIITVWKVSNNE
QPYRILICDASPVTCCFAHNKKILFVGTDDGCVLLYDLTEPTTMHQQMELEKNMMTVMRN
ATYTTGWQNEIHTSPIVCLGSVGSFENMSQLFSIDESARLCVWVVVDIISDVDDDVGLVP
HGRVKLVKSSVINVISNKPSSSGLGGSATFAVCPDSNTFYVGTDLGDVISCTRENKTRTY
NLPGNKSSVTSISFNQFISTLMLVSYKSGDIALFMLDRDTPVISWPLDGTSILSCDWSNS
RPSVFFSLDSTNHLQVWDLMAMDAAPVSDDSFEQKVICFSVDGHSQKSTNLLVAFDSCEF
EILKMKSHFVNSVSTDEVEQMTSLVQSFG
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcgaaccaaacgacctcggaacacgactcagcatcatcgaggtcacatgacatg
gttgccacgacgattaatttctcgggtgccaagcaacggagcgttgagagtaaaacaagg
aagagagttttgaatcgccgaaatgatctgctgactttgatccaacttgatttcaattca
tttgacttgtttgaccttgcaccagtcactgaatataacttctatatcaagaactttgga
agccagaactcaggacaggcatccacgcagtgtaatgatgacgcgatcgaaattgaaatt
caaaccgaccaaccagaagtcggggatcggtggtcgcaacatccaccagatggagctatt
gcatgtggaggcacaacagtaacagaagattccccccaccttcgaatgttggcagccatg
cgtgacgactcaaatcgcttcagcgagttcctcgtttacgctagtgacatcatcgactcc
tcgtttgaagaagccctcttgtggcgagggaacaaaccaaactcgttcaccccgattaca
agttgcgatgcgtcaacgaaattcaacacaaacatcccatatttgcatgggcgtaagatt
ctccacaccatatttggtaatggtatgattgctgttacgttcggtggtgcgtgtcatgat
gttacgacgagaatcgaccaacgcgggataatcaccgtgtggaaagtttcaaataatgaa
caaccttatagaatcttaatctgcgatgcttctcccgtgacttgttgttttgctcataac
aagaagatattgtttgttggaacggatgatggctgcgtgttgctttatgacctcacagag
ccaaccactatgcaccaacagatggagttggagaagaacatgatgacagtgatgagaaac
gccacgtatactacaggttggcagaatgagattcacacttcacccattgtttgtttgggt
tccgttgggagttttgaaaacatgagtcagctgttttcaatcgatgagtcagcacgttta
tgtgtatgggttgttgtggatattatatcagatgttgatgatgacgttgggttggttccg
catggccgggtaaagcttgttaaaagttccgtcattaacgtgatttctaacaaaccctca
tcatcaggacttggtggatcggctacgtttgccgtttgtccagattcaaatactttctat
gttgggacagatctgggtgatgttataagctgcactcgtgaaaacaagacacgaacgtac
aacctccctggtaataaatcatctgtgacttcaatatctttcaatcaattcatctccaca
ctgatgttggtttcttacaaaagcggggatattgctctgtttatgttggatagagacacc
cctgtaatatcctggccactagatggcacgagtatactctcatgtgattggtccaacagt
cggccatccgtgttcttctcgttagattcgaccaatcacctgcaagtatgggatctaatg
gcgatggatgccgcacctgtttctgatgactcatttgaacaaaaagtgatatgtttttct
gttgatggtcattcacaaaaatcaaccaacctgcttgttgcttttgattcttgtgaattt
gagatcttgaaaatgaaatctcattttgtaaactcagtttctaccgatgaagttgaacaa
atgacgtctttagttcaatcttttggttga
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