Ciona intestinalis (yellow sea squirt): 104265384
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Entry
104265384 CDS
T01056
Name
(RefSeq) WD repeat-containing protein 47-like
KO
K24746
WD repeat-containing protein 47
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cin04990
]
104265384
Domain-containing proteins not elsewhere classified [BR:
cin04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
104265384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_RIG_1st
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
eIF2A
TPR1-like_2nd
Motif
Other DBs
NCBI-GeneID:
104265384
NCBI-ProteinID:
XP_026695160
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MEILINDYDIINVIVDYLHSRRLFLSASSLEQECGLSPSRKLPECFETIREYSYDGQWDH
VRKLIQAFASTFDNFPIKRILFLLFRQRFCELCFHEDAQNVSLALKDIIEELQSICTEEE
YDQMVELIEGYYTDKEHKYVTKAAMQVATRHECYQDIVLVIEPLFYHQHNANGDEHNQRL
ISLITKGMLYDKCSAYCCSRAVDNTSNENIDKTQVTSSALNNSSITNVNASILHWMYSLN
DDVFKQRFRDSDVQIIINKINQSDRLISSLNPTFQNREQSTLKISQSPPGSPKWSKPSNT
GDSNALGDSPDPLPHTSSPGRQLPLDATTTKPAENVTTPEPMLKQEDNYKYTNPQDSYAN
FLAEKEDLRKERDRVLQDLRVKEERAMAIRKNLNADVSPFQDAPSPNYPQQSNPLPSYPS
QNAPLPISPHQHTSPVYPAQNAPMSTYTPHSHPSPTQNNPHPFKYYPIEKTEDPSAIRAV
AFHPRGEVFAVGSNSQILKICSMPRQRYQDSHLELLGTGVLDVCVKLPKVHKGSIYSTAW
NDDGSMLATCSNDKLIKLFDYSSTTMNVTGPSLELTHHNAPVRDVAFLTNYGSACVLANA
GADCIVYTNDCEVDAMLHKLSGHSEQVLSLYAWGSGMLVSTSQDKSVRTWDLRTSRCVSV
LGFSDASDQSPSVAASVCVDTRGRYMAVGRTDNMISIYDFNAGKIIKTYQAHNNEVRSVR
FNPVCPSVLLSGSYDGTAYVTDIEALFLSDHTDPSSYSFRAIHHKDKVIQCRWHPSGRFF
ATTSADQTCVLWTAYT
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggaaatattaattaatgattatgacatcattaatgtaattgtagattacttgcattct
agaagattgtttctaagcgcaagctcactggagcaagaatgtgggttgtccccatcaaga
aagctaccagagtgttttgaaactatcagagaatattcatatgatgggcaatgggatcac
gtaaggaagttaatacaagcatttgcctcaacatttgacaactttcctataaagaggata
ttgttcttgttgttccgccaacgtttctgtgaactttgttttcatgaagatgctcagaac
gtttcactcgctcttaaggatattattgaagagttgcaatcaatttgcactgaagaggaa
tacgatcaaatggttgaactgattgagggttactacacagataaggaacacaagtatgtc
accaaagcagccatgcaagtagcaacacgtcatgaatgttaccaagacatagtgttggta
attgaaccattattctaccaccaacataatgctaacggggatgaacacaatcaaaggtta
atatccttgataaccaaagggatgctttacgacaagtgttcggcttattgctgcagtaga
gcagtggataacaccagcaatgaaaatattgataaaacacaagttacatcatcagcatta
aacaacagcagtatcaccaatgttaatgcttccatattacactggatgtatagtcttaat
gatgatgtgttcaaacaaaggtttcgtgattcagatgttcagataattatcaacaaaatc
aaccaatcagatcgacttatttcaagtttaaatcctacatttcaaaacagagaacaaagt
accttaaaaatctcacaatcaccccctggttcccctaagtggtcaaaaccatccaacaca
ggcgacagtaacgcactaggggattcccccgacccattacctcataccagctccccagga
cgacaattgccgcttgacgcgacaactaccaaaccggcagaaaatgttacaacccctgaa
ccaatgctgaaacaagaggacaactacaaatacacgaatcctcaggactcttacgccaac
ttccttgctgagaaagaagatttaaggaaagagagagatcgtgttttacaagatcttcgt
gttaaagaggagcgagctatggctatcaggaagaaccttaatgcagacgtttcaccgttc
caagatgccccttcacccaattatccccaacaaagtaaccctttacctagttacccatcc
caaaatgcccctttacccatctcaccccaccagcacacatcacccgtttacccagctcaa
aacgcccccatgtctacctacacaccccatagtcacccctcacccacacaaaacaacccc
cacccctttaaatattaccccatagaaaagacagaggacccatcagcaatcagagcagta
gcattccaccctagaggagaagtatttgctgttggatctaactcacaaatacttaaaata
tgttcaatgccaaggcaaagataccaagacagtcacttggaacttctgggcactggtgta
ttagatgtttgtgtgaaactaccaaaggttcataaaggttcaatttactcaactgcttgg
aatgatgatggatcaatgctagccacttgttctaatgataaacttatcaagttgtttgat
tacagttctaccactatgaatgtaacagggccaagcttggaactcacccaccataatgct
cctgtacgtgacgtggctttcctaaccaactatggctcagcttgtgtgcttgccaatgct
ggtgcagattgtattgtgtacactaatgattgtgaagtggatgctatgctacataaacta
tcgggccattcagagcaagtattatcattatacgcatggggatctggaatgttggtatca
acatcacaagacaagtcagtacgaacatgggatcttagaacatcaagatgtgtcagtgtg
cttggcttcagtgatgccagtgaccaatctcccagtgttgccgcaagtgtttgtgttgac
acacgagggcgatatatggctgttgggagaacggataatatgatttctatttacgacttc
aacgctggcaagattataaagacataccaagcacataacaacgaagttagaagtgtcagg
ttcaacccagtttgccccagtgttctactatctggttcttatgatggtacagcatatgtt
actgatatagaagcattgtttttatctgaccatacagacccatcatcatattcattccgt
gctattcaccataaagacaaagttatacagtgcagatggcaccctagtgggagatttttt
gctactacatctgctgatcaaacttgtgttttatggactgcatatacttaa
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