Ciona intestinalis (yellow sea squirt): 104265394
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Entry
104265394 CDS
T01056
Name
(RefSeq) S1 RNA-binding domain-containing protein 1-like
Organism
cin
Ciona intestinalis (yellow sea squirt)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
HHH_9
S1
Tex_central_region
HHH_7
YqgF
HHH
HHH_6
HHH_5
DUF5329
YniB
Motif
Other DBs
NCBI-GeneID:
104265394
NCBI-ProteinID:
XP_009857620
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Position
2:complement(3220687..3223378)
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AA seq
795 aa
AA seq
DB search
MGESREKWDIAHLLSERLNVDKNTANNIIQMIEVQECTIPFISRYRKEVTHGMDPNTLRM
FLDTLKELRDVQKKATTAIRQVQKQEPLDHAVVESLNAAETVEEINVLLAPYKVDKKTLA
CRARTLGLDNAAKAILNNPRQLINLNEWVKKDCEGRANLKEVKTGVKHIICEAIARDKTT
LERIKRYLKPTCLTLEAKMSASKKKAMDAEKEKGGHSTSQNTSKFECYHHFQHNVSALRS
YQVLAINRGEALKELTVKIHISERAENNFIDWCNYKWAEEHKYEDMKTLLKECVTEAYTR
LLKPQVLRKTRSELTKTAQMDSVHVFGRNLKKLLLTSPVRGKIILGIDPGYKNGCKCAVV
SSNGMEILAVDVFYLHHANPAVSKLLQLLNKFNIQLIGIGNGTACRETEELVSRFIYVSC
KKDLKYCIVNESGASIYSVTEEAKQEMPDLDPNLRSAVSIARRLQDPLVELVKIDAKHLG
IGMYQHDIPDILMKATLQSVVEDCVTFVGVDLNVAGASLLRHVAGLKKTQVDKILKWREK
NGPFINRDQLLEVPGVGKKTFEQCAGFMRIVQKANTPSECQKKSVKTEHVKTEPTDKRKR
KITATSKNSKKQKLHHEVNPLDQTWIHPESYKTTEQFLKKINLSSSEVGKDYFISNIKQA
VRKKTISQFANELEVGEPTLQLIIDGLSAPCGYRDIRNVTSHFYKTGISCITDLRCGTTM
QGKVSNVVDFGIFVDIGVGTDGLVHSSDMKGKWEELRHVLGPNDLISVAVTNVNKPKKRI
SLRLVKTDVVETKFM
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaaagccgtgagaaatgggacattgcacatctactttccgaaagactaaatgtg
gataaaaacacagcaaacaacatcatacaaatgatagaagtacaagagtgtacaatacca
ttcatttcaaggtataggaaagaggtaactcatggaatggatccaaatacgttgcgcatg
tttttggacacccttaaggaactcagagatgttcaaaaaaaagctacaacagcaattagg
caagttcaaaaacaagaacctttggaccatgcagttgttgaatcactaaatgctgctgaa
actgtagaagagatcaatgttttacttgcaccatacaaggttgataagaaaactttagca
tgccgtgcacgcactttgggtttggataacgctgcaaaagctatactaaacaatcccagg
caacttatcaatttaaatgaatgggttaaaaaagactgtgaaggtcgtgccaatttaaaa
gaagttaaaactggagtgaagcatattatctgcgaagccattgctagagacaaaactact
cttgagcggataaaaagatacttgaaaccaacatgtttaacattagaagcaaaaatgtct
gcctcaaagaaaaaggcaatggatgctgaaaaagaaaaaggtggtcatagcacaagccaa
aacacttcgaaatttgaatgctaccatcattttcaacataatgtttcagctcttcggtcg
tatcaagtacttgctattaacaggggagaggcattaaaagagttaactgttaaaatccac
attagtgaaagagccgaaaataatttcatcgattggtgtaactataaatgggcggaagaa
cataaatatgaagatatgaaaaccttattaaaagaatgtgttacagaagcatatacccgg
ctgcttaaacctcaagtattaagaaaaaccaggtctgaattaacgaaaacggcacagatg
gattctgttcatgtgtttggaagaaatctaaaaaaactgctgttaacaagcccagtacga
ggtaaaatcattttaggaattgatcctggatacaaaaatggatgcaaatgtgctgtagtt
tcatcaaatggaatggaaattctggcagttgatgtgttctatctacaccatgcaaaccca
gcagtttccaaactgcttcaacttcttaacaaatttaacattcaactaattggcattgga
aatggaacagcttgtagagaaacagaagaactggtatcccgttttatttatgtttcttgt
aaaaaagatctcaaatactgcattgtcaatgagagtggtgcttcaatctacagtgtaacg
gaagaagcaaagcaggagatgccagatcttgatcccaatcttcgcagtgctgtatcaatt
gcaaggagacttcaggatcctttggtagaacttgtaaagattgatgccaagcatcttggt
ataggaatgtatcagcatgatataccagatattttaatgaaagccacactccagtcagtg
gttgaagattgtgtgacatttgtaggtgtagatctgaatgttgctggtgcctctttgcta
agacatgtggctgggttgaagaagacacaggtggacaaaatactaaagtggagagaaaaa
aatggacctttcatcaacagggatcagttgcttgaggttcctggagtaggaaaaaagaca
ttcgaacaatgtgctggatttatgcgaattgttcagaaagccaacaccccttcagaatgt
cagaaaaagtcagttaaaactgaacatgtgaaaactgaaccaacagataaaaggaaacgt
aaaattacagcaacatcaaagaactctaaaaaacaaaagttgcatcatgaagttaatcca
cttgaccaaacttggattcatccagagtcatataaaacaacagaacaatttttgaagaaa
ataaatttgtcatcttctgaggttggtaaagattatttcatttcgaacataaaacaagca
gttcggaaaaaaacaatttctcaatttgctaatgaactggaagtaggggaaccaacatta
cagttgataattgatggattatcggctccatgtgggtatcgagatattcggaatgtaaca
tcacatttttataagactggaatcagttgtattactgatttaaggtgtggaactacaatg
cagggcaaagtgtcaaatgtggttgatttcgggatctttgttgatataggagttgggaca
gatgggttagtacactcaagtgatatgaaaggaaaatgggaagaactgagacatgtactt
gggccaaatgatctcatctctgttgccgttacgaatgtaaacaagccgaaaaagcgcata
tcattaaggcttgtaaaaactgatgttgttgaaactaagttcatgtaa
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