Ciona intestinalis (yellow sea squirt): 104266185
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Entry
104266185 CDS
T01056
Name
(RefSeq) claudin-19-like
KO
K06087
claudin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03272
Virion - Hepatitis viruses
cin04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
104266185
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104266185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
104266185
04147 Exosome [BR:
cin04147
]
104266185
Cilium and associated proteins [BR:
cin03037
]
Other cilia and associated proteins
Stereociliary proteins
104266185
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
104266185
Exosomal proteins of colorectal cancer cells
104266185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM127
DuoxA
Fer4_Nqo3
MRAP
VirE2
DUF2140
TM225
Motif
Other DBs
NCBI-GeneID:
104266185
NCBI-ProteinID:
XP_009860118
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All DBs
Position
11:903982..907893
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AA seq
327 aa
AA seq
DB search
MGTHKMAANRHQFCFTIFLMLGVASTVMIFFILITPEWKTNSAVTSNSLKNFDMQRNRMG
LWKVCMEYLWKVVGARKVCDQYDPALVGVPGYLRTIQVMMMMAISFSLGGVVCSLLGLKR
VPLLSNKRKNKTILLAGVCHVFAGMITCVCVSRYAVEVTREYYAVPAYQLQVDARTLKYT
FGTCLYVGWAASALAVITGCLMMLFYKRCRKQEECIETDSESAKDRTESKHIDPDYKRVR
KTSLEKTPTPNSDFTKNDETHQSHPCSRCYHTKPTRSFSGTSGYYSMLSLFSNATQHSKI
SGNMVEICPLETNTKPLYQYVRISSKV
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgggtacacataaaatggcggcgaataggcatcagttttgcttcactatttttttaatg
cttggtgttgcctctactgtaatgatattctttatattgatcacaccggaatggaaaaca
aactctgcagttacttctaactctctcaaaaactttgacatgcaacggaacagaatgggc
ttatggaaagtatgcatggaatacttgtggaaggtcgtgggagctcgtaaagtttgcgat
caatacgatcctgcattagttggggtacctggttacctaaggacaatccaagtcatgatg
atgatggcaatcagcttttcgctaggtggcgttgtatgttccctcctaggtttaaaacgg
gtccctcttttgagcaataagaggaaaaacaaaactattcttcttgccggcgtttgtcat
gtttttgcaggcatgataacttgtgtatgtgtgtctcgttacgctgtggaggtaacaaga
gaatattacgccgtacctgcttatcagcttcaagttgatgccagaaccctcaaatacaca
tttggaacatgtttgtacgtggggtgggctgcttctgcccttgcagttataacaggatgt
ttgatgatgttgttttataaacgctgccgtaaacaggaggaatgtattgaaaccgactct
gaatcggcaaaagaccgaacagaatcaaaacacattgatccagactataaacgggtgcga
aaaacatcgttggagaaaactccaacaccgaactcggatttcacgaaaaatgacgaaaca
caccagagtcatccatgtagcagatgttaccataccaaacctaccaggagcttcagtggt
acaagtggatattatagcatgctttctttattctcaaatgcaactcaacacagcaaaatt
agcggcaatatggtagaaatttgtcctttggaaacaaatactaagccattgtaccagtac
gtccgcatatcctcaaaagtgtaa
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