Ciona intestinalis (yellow sea squirt): 104266248
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Entry
104266248 CDS
T01056
Name
(RefSeq) histone deacetylase complex subunit SAP18-like
KO
K14324
histone deacetylase complex subunit SAP18
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03013
Nucleocytoplasmic transport
cin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104266248
03015 mRNA surveillance pathway
104266248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
104266248
03036 Chromosome and associated proteins [BR:
cin03036
]
104266248
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104266248
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
104266248
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
104266248
NCBI-ProteinID:
XP_009860292
UniProt:
F6SNN8
LinkDB
All DBs
Position
11
Genome browser
AA seq
157 aa
AA seq
DB search
MPQGRIEDRLRSVAQDAPVVPEKVIETKPVDREKTCPLLLRVFVSDNGRHHRMEEFSRTS
LPGNELQIYTWMDATLKELTSLVKEVRPDARRKGTTFKFAAVYPGTMGRYRLKDIGQTVG
GHKGPDDAISLASQKFQIGNFMDIAISLPRDQRQQRY
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaggtagaattgaagacagattgcgcagtgttgcacaagatgcaccagtggtg
cccgagaaggtcatagagaccaaaccggtcgaccgggaaaagacgtgccctctactgctt
cgtgtgttcgtttcagacaacggtagacatcatagaatggaagaattttcaagaacctcg
ttgccaggaaatgaacttcaaatatatacatggatggatgccacacttaaagaattaaca
agcttagtcaaagaagtacgaccagatgcaagaagaaaggggaccacattcaagtttgct
gcagtatatcctgggaccatgggcagatacaggttaaaggacattggacagaccgtcggc
gggcataagggccctgatgacgccattagtctcgcttctcaaaaattccaaatcggaaat
tttatggacatagcaatttcactgccgcgagatcaaaggcagcagcggtattaa
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