Ciona intestinalis (yellow sea squirt): 104266434
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Entry
104266434 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC104266434
KO
K06842
semaphorin 6
Organism
cin
Ciona intestinalis (yellow sea squirt)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Phostensin_N
Motif
Other DBs
NCBI-GeneID:
104266434
NCBI-ProteinID:
XP_018670293
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Position
14:complement(3729305..3743917)
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AA seq
1227 aa
AA seq
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MAFANVMLVVLLVSALLMIKTKGDFPRNQAPKTVINLSDVPVKAFTGDEVTRDNRLSYLQ
LVKRIRMGTNDMLAIASRDQLYFINPEKFRTDNIRDIQYDNVITWKSKNMTRELCSMKGQ
TEELCHNFLSVVATTNDEGSELLVCGTNSFSPICTTYTVSYMSSGLVMVRGEDFSGKQRC
PYGPNQPSAAIFTGGSLYAGTYQAFTGVSPVVSRSMGDNTPLKTASIDEAMNRPRFVKMI
EDDKRVLVFFNEMQKLSSGEVRMVAQVGQVCKNDVGGDRVLSRMWTTFIKSRLNCSYNGF
YLNELRDVTEAKFVNGVETIFATFSTPEDSLAGAAVCSFTMNAIREALHGAFLVGSDPSA
QTVGTSPAASRHPASCPSEKMTDSELFFIKSHPQMKEQVPGSLLMTNQGSRWTTIALDTK
AGPNDITVILVGTEDGQIIKGLGPNQMWEHGAIISKQDVFDSNRCSSGNPEVEDRRVLSI
LVDAERGFLLVGFKHCVVTVPLRTCGVHNCQEECVGSADPYCGWEVRSNSCVPYLTANQG
LAQNVAGALKSPESYGACQPEVEENTNSFVEVQKPIVEVEEMIPKNETTKPEGRDALVPK
VNCVTGVDPCSSKFDLVVVIVAGVGGFIFGVFLTIILIVLYRKKVCCSGFTSNDDDFKKK
QLKQQHLQAMYPDDRRGSLTRTARKTYFGWKEWFCRSSKPNTPAATPSLNNKLDQEHPAE
RRPRRLNDYSEAPTLKSTAQPNQHAPKPRRMSSRHNSTSSNGSVPNGYPLTRQASVLANG
PIVYEQGQPLLLNNQTDEAYYSPTTECILTNEMTEAPTLPHPKRISHASMTGEYPITSLH
GAAESGQLPTASTKMRRRNEKATSQTNEIMRESDTAIRSFETTLHHMQQQGIPVDNSRER
LNSNDSGKGESVRNSIRTELEPIATNASAFKQRPTSLNLPQNGVGHRRRLTSEPSYPNDV
ITPTGSISSGSSSGRRNPPVRQHSFGFHQSSSTRSQPTTPVGGAPGKLSVYHPKPSEASE
VGHYATLPKNEQPQVGRRKERQHQQRHHMEQLHERLCPRLQQEFMQQQQQQQQQQQQQQQ
QMHKAHMIQEVMKNPRTTEHQNQRRGVVTRSCGSPGKHPAPPLNRYPSLQVRGPNAYQEY
QRMPMLKNQPINHYPSLPHGSSTSPYGKNSNNNNTYGTLTAFERPTTLHRREKLPQMMRQ
SSVPGYAAPKPMYVATPVVPPSGTREM
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggcctttgccaacgttatgcttgtggtgctgctcgtatcagctttactaatgatcaaa
acgaagggagattttccacgaaaccaagcaccaaagacggtcataaatttatctgatgtt
cctgttaaagcatttaccggcgacgaagtgactcgagacaacagattaagctatctgcag
ttggttaaacggattcgaatgggcaccaatgacatgctagcaattgcatcaagggatcaa
ttgtacttcatcaatcctgagaaatttcgcacagacaacatccgagacatacaatacgat
aatgttattacttggaagtctaaaaatatgacgagagaattatgctcgatgaaaggccaa
acagaggaactgtgtcataactttcttagcgtcgtagcgaccacgaatgacgaaggcagc
gaactgctggtgtgcggcaccaattcattcagcccgatatgcacaacatacacggtctcc
tacatgtcatctggtttagtgatggttcgtggagaagatttctccggcaagcagagatgc
ccttatggtcctaatcaacctagcgcggcaatttttaccggtggttcgttgtacgcggga
acctaccaagcttttactggtgtttctcccgttgtctcgcgaagcatgggcgacaacaca
ccgcttaagactgcctctattgacgaagccatgaatcgtccccggtttgtaaaaatgatc
gaagacgacaaacgggttcttgttttctttaacgaaatgcagaagctgtcgtcgggggaa
gtccgtatggtggcgcaagtgggacaggtttgcaaaaacgacgttggtggagaccgtgtg
ttatctcgtatgtggacaacctttattaaatcgcgactcaattgttcttacaatggtttt
tacctgaatgaacttcgtgacgtcacagaagcaaaattcgtaaacggagtggaaacaatt
ttcgccactttttcgacacctgaagattctttggctggagcagccgtgtgttctttcaca
atgaacgcaatacgagaagcactacatggagctttcttggtcggtagcgacccttcagca
caaacagtggggacatctccagcagcttctagacacccagcatcttgtccaagtgaaaag
atgacagattcggagctcttctttatcaaatcacatccacagatgaaagaacaggtccct
ggttcgttgttaatgaccaaccaaggttcaagatggacgaccatagcgctagacaccaaa
gcgggcccgaatgacatcacagtgatccttgttggcacagaagacggtcaaataatcaaa
ggattgggtccaaaccaaatgtgggagcatggggctatcatttcaaaacaagatgttttt
gacagcaacagatgttcctctggtaatcccgaagtagaggatagaagagtgttgagcatt
ctggtcgacgctgaacgtggatttcttctggttggtttcaagcattgcgtagttaccgtt
ccattgaggacatgcggagttcacaattgccaagaagaatgtgttggttctgctgatcct
tattgtgggtgggaggtacgatcgaactcctgtgtaccttatctgacggcgaaccagggc
ctcgcacaaaacgtagctggtgctcttaagtcgccagaatcatacggtgcatgccaacct
gaggtggaagaaaacacaaatagttttgttgaggtacaaaaacccatagtggaagttgaa
gaaatgatacctaagaatgaaaccaccaaacctgaaggaagagatgccttggtccctaaa
gtgaattgcgttactggtgtagatccttgttcatctaagtttgacttggtggttgttata
gtggccggagttggcgggtttatttttggcgtgtttctcaccattattctgatcgtgttg
taccgaaagaaagtttgttgtagcgggttcacttcgaacgatgatgattttaaaaagaag
caactaaagcaacaacatctgcaagcaatgtaccctgatgatagacgaggttctttgacc
agaacagctcgaaaaacctacttcgggtggaaagaatggttctgtcgatcatccaaacca
aatactccagctgccacaccaagtctgaacaataaattggaccaagaacatccagcagag
cggcgcccacgaagattaaatgactacagtgaggctcctacattgaaatctacagcacag
cctaatcagcatgcgcccaaaccaagacgaatgtcatctcgacacaacagcacaagcagc
aatggttctgtaccaaacggatatccccttacacgccaagctagtgtccttgcaaatggt
ccgatcgtatatgaacaaggacaacctcttctacttaacaaccaaactgacgaagcttat
tattctccaactacagaatgtatacttaccaacgaaatgaccgaagccccgaccttaccc
caccctaaaaggatctcccacgcttccatgacaggggaatacccgattacgtcactccac
ggcgcagcagaaagcgggcaactgccaactgcgtcgacaaaaatgcggcgacgcaacgaa
aaagcaacgagtcagacgaacgaaatcatgcgggaatcggacacagcgattcggagtttt
gagaccacacttcatcacatgcaacaacaaggaatccccgtcgataattcaagagaaaga
ttgaactccaatgacagcggtaaaggggaaagcgttcgtaactcaataaggacagaactc
gagccaatagcgacgaatgcatccgcgtttaagcagcgaccaacttctcttaatcttcca
cagaatggtgttggtcatcgtcgacgtctgacgtcagagccatcttaccccaatgacgtc
atcactcctactgggtccattagctcaggctcgtcatcgggccgacgaaacccaccggta
cgtcagcattcgtttgggtttcatcagtcgagttcgactcgttcccaaccgactacgccg
gtaggtggcgcgccagggaagctctctgtttaccacccgaagcccagcgaagcgtccgag
gtcgggcattatgctactttgccaaaaaatgagcaaccacaggtcgggagacgaaaggag
cgacaacaccaacagcgtcaccacatggagcaacttcacgaacgtttgtgtccccgttta
cagcaagaattcatgcaacaacagcagcaacaacagcaacaacaacagcaacaacaacag
cagatgcacaaagctcatatgatacaagaagttatgaagaacccgagaacaacagaacat
caaaaccaaaggcggggggtcgtaactcgttcgtgtggttcgccagggaaacaccctgca
cccccgcttaaccgctaccccagtcttcaagttcggggtcccaatgcatatcaagaatac
caaagaatgcccatgttgaagaaccaaccaataaatcattacccgtctttgccgcatggt
tcgtcgacttctccttatgggaagaacagcaacaacaacaatacatacggcactcttaca
gcattcgaaagaccaacaactttacacaggcgcgaaaaacttccgcaaatgatgcggcag
tcttcagtgcctggttacgcagcgccgaagcctatgtatgtcgctacacctgtagtgcca
cctagcgggacaagggaaatgtaa
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integrated database retrieval system
