Ciona intestinalis (yellow sea squirt): 104266468
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Entry
104266468 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC104266468 isoform X2
KO
K23400
doublecortin domain-containing protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
104266468
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
104266468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX2_DCDC1
DCX
Motif
Other DBs
NCBI-GeneID:
104266468
NCBI-ProteinID:
XP_009861059
LinkDB
All DBs
Position
Unknown
AA seq
1880 aa
AA seq
DB search
MSQVGKVRRSSLSSKDSMEEILVNQYREAIGKKQRNRKSKESEKRLLKNPYLQSVAPDDK
SWIVQSQKRPMTAKPRTCPRRRFNSLDVAIPLGDSKEIEGDEHSSSFASDSESDSENSDN
KENKSKKSQEVKISLRKQRPASAQVLPSRFNEATDPNEVVTPSHDLSKPLFKRQPYTITC
NCYKNGQCENSVRVAAPSIKQLLEVSTQKLSLNMAARRVFLVDGREVFRPRDIPKDADVF
ISKGEPFRDPFKAIKNSRSLHSASTCSMKGGGLPYRRKVKPPGSKRLHELVGKHTQRVII
FRNGNGSESHEVVMDPQDGSSRFLDDCTQRLQLTSAARVLYEWSGESLSCFQQIEQIESR
LTSSSSAVFGPLWVSKGEGFNPVGSHLYMESAVTKLRGQLQDARKCKNELKHALQRDYDK
VTKPEILDLPDENIEATLDLVMADIDEFRNLIRKYKRRLEAIKEMVMNQSSEGHNYTMKH
IKEIESNDRLVGEHGLRIEIFDNGNDVSGQGIYLNMRDVQRGAKGDRDLIKARFLEAVTS
WHKPIDPSGPARSSVIRRLFNESGQEIMDVLAVKNDDKVWVSYGEDLKPCSVPALTVQLE
RTSAVAVVNDDGGNENKVYRETFDPTIDLIDGSDRFNEWELSEGYPMFHDFPLLSTFHES
QQDNIQKSIQSSKFSVHDPFLQHKKQTDIVLRPKVTVEQKQPKKMLWPREGQTWIVNQHG
QIYTRAFPSLALTLDTSQQIVTHYKDGTLCDGYAVTLQKKYKGNSEQNWGFSPEGNIFPL
HSGKPDQQVLTYIDESFVSKVEDRASYELRLAQNNENNPNELSVHALEPVQRGPVDMTSS
GLDYTVVVLERFEGQSSKVRSQRWAIKQESLAIPNQWKHTKVVNPVWKKLAYSWPVLPNG
NWNTDYDWPLEGSILSNAPPLHNKKETKSTTEGSKPLKVYRNGEKDSKRFVMVVAPEMSK
IEKEKSKTNKNSKRKPQKSPTKDSQQIEKLELTLFLERCTSLLSLPFAARRLFDSNGHEI
ASLRGLKRQQAVYVSVGDAWADPMVSKNEHQRRHLLAKLSHDISMIAAFCSLRNPEVYWD
EETFDFVVEMERGATAGSRLILGKCSLSREKRQEISKKSIDTHIDLQKMENESSSDRSEN
SKDGLSAHEVSHRRMEHTFQSKKYPWQQQQTDSSDDQTKEKPKKAKKPKKKAPNMVDSNQ
QLVFKDGFISPASATGLALGVTGLDLDNVPGNVEVVLCKKSNDDPVQRWELVDGFIRLSC
SHRLVLGVVMPPYKPGTDDPISYHGCAISVQHLKHSEFGRAHQQWLWDPVFNFLEPFRSN
STDKEITAANQVSICTYAVVGQAVINQEGYIIDKLTESPSNPVMVCCSCAKVIRGQYQLT
KAPEQWSFSCAMGNARKNGLKQRGSFSCLNGKVDLSTYEAETTLKHWVSQLSKLRQETSL
RLLNREIQSATTSQACRLLVMRNGEGRLKPGELIVGTTVTGILEQCTQRLSLGTAARRLY
TSDGMHVLHIEQLIEWAVKNFQKYQQQQMREIPREKSLEGEEPEGNPVSPDDGINSNEGT
PDHLAAEADVKMTTSDLTKKLRPESAKRRHNSKSSEQLQPEMQEVPISTILRYPIEVWVS
CGENFIPSSKAEKTLLENLKQQKNRNSGNFVLDTEKHVLRHMQGRRYKEMSPAELKATKS
PQQPILLDGGWMETTKAETTRLERVHRLEEKISESRPLPLRPKSRGIDLNKDLYKQPNRK
RVMVYMNGNPPSKSVFVWGETLTEILADATERFVLPRPARLLYNEEGKKVTTFDEVERDS
LLCITMGDSLRGRPKHSNIEMKANWARVRKQRGPHATNIKVTKTQYDPKFTDVDPFGPPA
LATINAPASLAWEINTDQEN
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagttggcaaagttcgacgttcttcattatcgagcaaggatagcatggaagag
attcttgttaatcaatatcgtgaagcaattgggaaaaagcagcgaaatagaaaatctaaa
gaatcagaaaagagattattaaaaaatccctaccttcaaagtgttgcaccagatgataaa
tcatggatagtgcagagccaaaagcgacctatgacagcaaaaccaagaacttgccctcga
agacgttttaatagcctcgatgttgcgataccattaggtgacagtaaagagatagagggt
gatgaacattcctcttcatttgcgagcgatagtgaatcagattcggagaactctgacaac
aaagaaaacaagtcgaaaaaatctcaagaggtgaaaatttctttaagaaaacaaagacct
gcttctgcacaagttctaccaagtcgattcaatgaagccacagatcctaatgaggtcgtg
actccaagccacgatctttcgaagccactgtttaagcgccaaccttatactattacatgc
aactgttacaaaaatggtcaatgtgaaaattcagttcgagttgctgccccttccatcaaa
cagcttctggaagtctcaactcagaaactgagtttaaacatggcagcacgacgagttttt
ctcgttgatggtcgggaagtatttagaccgagggatattcctaaagatgcagatgtcttc
atttcaaaaggagagccttttcgcgatccattcaaagcaattaaaaactcccgtagcctc
cactcagcctctacatgttcaatgaaagggggaggtttgccctacagaaggaaagtgaaa
cccccaggttcgaaacgtttgcacgagcttgtaggtaaacacacacagagggtcattatt
ttcagaaatggaaacgggagtgagagtcacgaggttgtgatggatcctcaggatggttca
tccaggtttttagacgactgcacacagaggttacaactgacatcggcagctcgggtttta
tatgagtggagtggggagagtttaagttgctttcaacaaattgagcaaattgagtccaga
ctgacatcaagctcatccgctgtgtttggtccattatgggtttccaaaggtgaaggtttc
aacccagtgggttcgcatttgtacatggaaagtgcagtaactaaacttagaggccaactt
caagatgcaaggaaatgcaaaaatgagctgaagcatgcattgcaaagagattatgataaa
gttacaaaaccagaaattttagatttacctgatgaaaatattgaagctactttggatctg
gtcatggcggacattgatgaatttcgtaatttaattcgaaaatacaagagaaggttggaa
gcgattaaagaaatggtgatgaatcagtcatcagaaggacataattacaccatgaaacat
atcaaagaaattgaatccaatgacagattagttggggaacatggcttacggattgaaatt
tttgacaatgggaatgatgtatcaggccaggggatttatcttaatatgcgggatgtgcag
cgaggtgcgaagggagatagagatcttataaaagcaagatttctggaagcagtaacttca
tggcataaaccaattgatccaagtggtcctgcaagaagttcagtaattagacgattattc
aatgaaagtgggcaggaaattatggatgttttggcagtaaaaaatgatgacaaagtatgg
gtatcatatggagaggatttaaaaccttgttctgtgccagcacttactgtacagcttgaa
cgaacatctgcagttgctgtggtaaatgatgatggtgggaatgagaataaagtttatcgt
gaaacatttgatccaacaatagatttgattgatggatcggacaggttcaacgaatgggaa
ttaagcgagggttatccaatgtttcatgattttccattactcagcacttttcatgagagt
cagcaagataatatacagaaatcaatacaaagcagcaagttttctgtacacgaccccttt
ctacaacacaaaaaacaaacggacatcgtattaaggcccaaggttactgtagaacaaaaa
caaccaaaaaagatgttgtggccacgtgagggtcagacatggatagtcaaccagcatggt
cagatctacactcgagcttttccaagtcttgctctcactctagacacatcccaacaaatt
gttacccattataaagatggcaccttatgtgatggatatgccgtcacattgcaaaaaaaa
tacaaaggaaacagcgaacagaactggggttttagtccagaaggaaatatctttccttta
cacagtggaaagcctgatcaacaagtgctcacttacattgatgaaagttttgtttcaaag
gttgaagaccgagcgtcatacgaattacgactggcgcagaataatgaaaataaccccaat
gaattgtcagtacatgctctagaacctgtacaaagaggtccagttgatatgacttcatct
gggctcgattacacagtggttgtgcttgaacgatttgaaggtcaaagttcaaaggtgaga
agtcagagatgggcaatcaaacaagagagcttagcgattccaaaccaatggaagcatacc
aaggtggtaaatcctgtttggaaaaagctggcttactcgtggccagtgttgccaaatgga
aactggaacactgattatgattggccacttgaggggagtatattatcaaatgcaccccct
ctacataacaagaaagaaactaaatcaacaacagaaggttccaaaccactgaaagtgtac
aggaatggagaaaaggattcgaaaaggtttgtgatggttgttgctcctgaaatgagtaaa
atcgagaaagagaaaagcaaaaccaacaaaaactcaaagagaaaaccacagaaaagtcca
actaaggattcgcagcagattgagaaactggaactaacattattcctagagcgttgtact
tcactgctttctctaccatttgctgcaaggaggttatttgacagcaatggacacgaaatt
gcttcacttcgtggtttaaaacgacaacaagccgtttacgtttctgttggagatgcctgg
gcagaccccatggtgagcaagaatgaacaccaacgtcgccatcttctggccaagttatca
cacgatatttctatgattgcagctttctgctctcttcggaatccagaagtctactgggat
gaggaaacatttgattttgttgttgagatggaaagaggagcaaccgcaggatcgaggttg
atcctcgggaaatgctctttatcacgagagaaaaggcaagagatctcaaaaaaaagcata
gacacgcatattgacttgcagaaaatggaaaatgaaagttcttctgaccgttctgaaaac
agcaaagatggactgagtgctcatgaggtcagtcatagaagaatggagcacacatttcaa
tcaaaaaagtatccatggcaacaacaacaaactgatagcagtgatgaccaaacaaaggaa
aaacctaaaaaagcaaaaaaaccaaagaaaaaagcaccaaatatggttgattcaaaccaa
caactggtgtttaaggatggttttatcagtccagcaagtgccacaggattggcattgggg
gtgacggggttggatcttgacaatgtacccgggaatgttgaagtggttttgtgcaaaaag
tcaaatgatgacccagttcaacgttgggagttggttgatggattcattcgcttgtcgtgc
agtcacaggttggtcctgggtgttgtaatgcctccatataaacctggaacagatgatccc
atttcctaccatggatgtgctatctctgtgcagcatttaaaacacagtgagtttggtcga
gctcaccaacagtggttgtgggatcctgtttttaattttcttgaaccatttcggtcaaat
tcaacggacaaggaaatcactgcagcaaatcaggtgtccatctgtacatatgctgttgtt
ggtcaagcagttatcaaccaagaaggttatatcattgataaactgaccgagtcaccaagc
aaccctgttatggtctgctgttcatgcgcgaaggttattagaggtcaatatcaacttacc
aaggcaccagagcagtggtcattcagttgtgcaatgggaaatgcaagaaaaaatggatta
aagcagcgtggaagtttctcgtgtttgaacggaaaagttgatttgtcgacatacgaggct
gagacaactctcaaacactgggtgtcgcaactgagcaagttgcgtcaggagacgagtctg
cgattactcaaccgtgaaatacaatctgccacaaccagtcaagcgtgtcggttattggtc
atgcggaacggagagggtcggttaaaaccgggagagctgattgtgggaacaacagttaca
gggatattggaacaatgcacacagcggttgtcacttggtacagcagctcgtagattgtac
acaagtgatggaatgcatgttctacatattgaacaacttattgagtgggctgtcaaaaat
tttcaaaaatatcagcagcagcaaatgagggaaatcccccgggaaaaatcccttgaaggt
gaagaacctgagggaaatcccgtatctccagatgatggtattaactcaaatgaaggaaca
ccggaccatctcgctgcagaagccgatgtaaagatgacaacatcagatcttactaagaag
ttacgaccagaaagtgccaagcgtcgacataattcaaagtcatcagaacaactccaacct
gaaatgcaagaagttccaatttcaacaattcttcgatatccgattgaggtttgggtttct
tgtggtgagaatttcattccttcctctaaagctgagaaaactttattggaaaatttaaag
caacaaaaaaatcgtaactctggaaattttgtgcttgatacagaaaagcacgtgttgcga
catatgcaaggtaggagatacaaagagatgagtcctgctgaacttaaagcaactaaaagt
ccccagcaaccaatactacttgatggtggttggatggaaactacaaaagctgagacaaca
aggttggagagagttcatcgacttgaagaaaaaatatccgaatctcgacctctgcccctt
cgtcctaagtctcgtggaatcgaccttaacaaggatctttacaaacagcctaacagaaaa
cgggtgatggtttacatgaatggcaacccaccaagcaagtcagtttttgtgtggggtgaa
acccttaccgagatactggcagatgctacagaaaggtttgtacttccaagaccagcacgc
ctactttacaatgaggaggggaagaaagtaacaacgtttgatgaagtggagcgcgattcg
cttctctgtatcacaatgggggattccctcagaggaagaccaaaacacagcaatattgag
atgaaagcaaactgggcgagagtacgtaagcaacgtggaccgcatgctaccaacattaaa
gtcacaaagacacaatatgatcccaagtttacagatgttgatccgtttggtcctcctgct
cttgcaaccatcaacgctcctgctagtcttgcttgggagatcaataccgatcaggaaaac
taa
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