Ciona intestinalis (yellow sea squirt): 104266744
Help
Entry
104266744 CDS
T01056
Name
(RefSeq) atlastin-2-like isoform X1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
104266744
Membrane trafficking [BR:
cin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
104266744
Autophagy
ER-phagy
ER-phagy recepters
104266744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
HEAT_ECM29
Ccdc124
Uteroglobin
PARP_reg
FabD_helical_ins
Motif
Other DBs
NCBI-GeneID:
104266744
NCBI-ProteinID:
XP_009862002
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MASNTRQPELSEIKTVNILGFQNHNLNIKIDKLQEIFFGIKQPVAIISVAGAMRKGKSFM
LNMLLHHLLKWNLNSRNPTGDEIIRNVFQCKGGNERVTIGINITDKPIILMNKVGEEVAV
FLMDSEGLFDKKQSATVFAISTLLSSLQIFNVSEQIQECDLQYLQMFTNYTKLSAAHIGH
SKAFPELLFLIRNYQLEDVWGVEEGQRYLEKFLQSDVEENQRVREVLGENFAHLRCFLLP
HPGETVAKWKQTRQMWKPRKESKPNICFADINNKDFVAGVEELAEQLFGKEHLIVKKLCG
DVITATEFIDLVPLYVKVFTGDDIPTPETITKVQNQCMFITKLRKLESEYCTAMSREVVD
EYIPLEKLEDIHTKQLTQALKVLDSFSVILREDESKAERKYMEKRLQSAFHEIQTRNIAH
KKKQIIEIKQCGEKAAELFRGWLKEAANGQYVEDISEERNVAKQKAFEAFNKCVQVYDKD
LVKEYVSNLKKYIQSEDDQFIRKNAERLKSLTEKLEKKISCAAGAYMEIIENSIEDPDKA
QMVNFNELHQVASDKALQVFEEAGVNKTLKCRQDALNTLKTKVEQLASNYQKRLEKYKET
GKLLKVVKKAVQEYDTHFGKVSL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaatacacggcaacctgagctatcagaaatcaaaacagtcaacatcttggga
tttcaaaatcacaatttaaatataaaaatcgacaaacttcaagaaatattttttggtatt
aaacaacctgtggcaattataagtgtagcaggtgcaatgcgcaagggaaaatcatttatg
ttgaatatgctactgcaccatctattaaagtggaatttaaattccaggaaccccactggt
gatgaaataataaggaatgtgtttcaatgtaaaggggggaatgaaagagttacaatagga
attaacattacagacaagccaataatattgatgaataaagttggagaggaagttgctgta
tttttaatggactctgaagggttgttcgacaaaaaacaaagtgctactgtatttgctata
agcactttgcttagctctctgcaaatcttcaacgtatcagaacaaattcaagaatgtgat
ttgcaatatttacagatgttcactaattatacgaagttatccgcagcacatataggacat
tcaaaagcatttccggaacttctgtttttgataaggaactatcaattagaagacgtttgg
ggcgttgaagaaggccaacggtatcttgaaaaattcttacagagtgatgtagaagaaaat
cagcgggtgagagaagtattaggggaaaatttcgctcatctcagatgtttcctgcttcca
catcctggagaaactgtggcaaaatggaaacaaacaagacaaatgtggaagccaagaaag
gaatccaaacccaacatatgctttgcagatattaataataaagattttgttgctggagtt
gaggagttggctgaacaattattcggcaaggagcacctaatagtaaagaaactctgcggt
gatgtcatcacagcgaccgagtttattgatcttgtccctctatatgtaaaagtatttact
ggtgatgatatcccaaccccagaaacaattactaaagtccagaatcaatgcatgtttatc
accaaacttcgtaaactggagtctgagtactgtactgcaatgagtagggaggtggtagat
gaatacattccgctggaaaagttggaagacatacacaccaaacaacttacccaagcactg
aaagtgttggatagtttcagtgttattttaagggaagatgagagcaaagctgaacgaaaa
tacatggagaaacgtttacagtctgcatttcacgagattcaaactaggaacattgcccac
aagaaaaaacagataatcgaaataaaacaatgcggtgagaaggctgcagaattgttcaga
gggtggctaaaagaggctgcaaatggtcaatatgtagaggatatttcagaggaaagaaat
gttgcaaaacagaaggcgtttgaggctttcaataaatgtgttcaggtttatgacaaagac
ctggtaaaggaatatgtgtctaatttgaaaaagtatattcaatcagaagatgatcaattt
attaggaaaaatgctgaaagattgaaatctcttacagaaaaattggaaaaaaagatttcc
tgtgctgcgggtgcatacatggaaataattgaaaatagtattgaagatcctgataaagca
caaatggtaaattttaatgaattgcatcaagtggcctctgacaaagctttgcaagtgttt
gaagaagctggtgtgaacaaaaccctaaaatgtagacaagatgcactaaacaccttaaaa
actaaagttgaacaacttgcttctaactatcagaaaagattagagaaatataaggaaact
ggaaaattgttgaaggtggtaaaaaaagctgtgcaagaatacgatacacattttggaaag
gtgagtttatga
DBGET
integrated database retrieval system
