Ciona intestinalis (yellow sea squirt): 108949286
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Entry
108949286 CDS
T01056
Name
(RefSeq) zinc finger and BTB domain-containing protein 49-like
KO
K10500
zinc finger and BTB domain-containing protein 17
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
108949286
04121 Ubiquitin system [BR:
cin04121
]
108949286
Transcription factors [BR:
cin03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
108949286
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108949286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-Di19
zf-C2H2_11
GAGA
BTB_KLHL33
BTB_BTBDG
zf-C2HC_2
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
108949286
NCBI-ProteinID:
XP_026690285
LinkDB
All DBs
Position
5:229707..237316
Genome browser
AA seq
753 aa
AA seq
DB search
MENSFYLKSIPLHVEGHGDKLLKALYDQQRNCQLCDVSLIVENNSFPAHKAVLASYSSYF
QALFDRGKQSDDVVSKVCNVTTIHLSSVSSKTFIPILHFLYTSKLHLFEENIRDVMKTAG
KLQIHSIVQACERVIDDKIVLPSIHEIKTLNIPCTNVINENSTPSVLFVDLKSEDDDEKS
CEAADSTNASFLPSSSDDTEKQKLCGNRTLKKKSNPKKIKFKENASTPENWKLTRSIDNI
STISPTSIFGRIGSQAGRRVGLSQQVSTSTSVDSANKTISSTSDFSIDPLIFEPTNESLG
NIFDNDPALIVDDLASESCLLSNNFTEQSSTSLATPKTTEALQVQSVYSISPKLTKKVKL
FNERSPPEMNKNYLLPTSVDKNLVPSFSSSLFNERHTKPSVYTCKECLKYFTNITDAFHH
CYTEHQQSKKSLDISNRLLDTKSHSCQHCGRIFNNKNNLKRHILIKHTADKRFKCSHCGR
RYAIRQSLQYHIKSVHNKSINDITVDSPQTSSLMMENFSSLLAAPTVAHPTSSLTFSSSV
ELNEDVLNEAETFASTCTTSYLNQITTIDNLPPKPSCKLPTIQHIESIRSPGVSLPDDIL
VETGMKTSVKTKSTASYQGGSPFVLSESSKLPALLPALPEDQKKSPGDFHQITSHRVAAK
LHRCDHCGHIFPTVQAFTRHKRACNKYECPICHRGFSQVGNMRRHMKIFHSDQKPFECKV
CNKAYGIQQSFRYHMRDKHGIILGKPNSKAEEK
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggagaattcattttatttgaagagcattcctttacatgttgagggacatggagacaaa
ctcttgaaggcactttatgatcagcaaagaaactgtcagctctgtgatgtttcattgatt
gtcgaaaacaattcgtttcctgcccacaaagctgtacttgcatcatacagttcatatttt
caagctttgtttgatcgaggaaaacaatctgatgatgttgtatctaaagtttgtaatgtg
acaaccattcatctatcttctgtttcatcgaaaacatttatcccgattttgcatttcctt
tacacatcaaaacttcatttgtttgaggaaaatattcgagatgtcatgaagactgctgga
aaacttcaaatacattcgattgtacaggcatgtgagagagtaatagatgataagattgta
cttccaagtattcatgaaataaagactttaaacattccgtgcacgaacgtgataaatgaa
aactcaacaccaagtgttttgttcgttgatttaaaatctgaggatgatgatgagaaatct
tgtgaagctgcagattccaccaatgcttctttccttccatccagtagcgatgacactgaa
aagcaaaagctatgtggaaatcgaacattaaaaaagaaaagcaacccaaagaaaattaaa
tttaaagaaaatgcaagcacacccgaaaactggaaattaacccgaagtattgacaatata
tccacaatctcgccgacttctatatttggtcgtattggaagccaagctggtcgtcgcgtg
gggttgtcacagcaggtgtcaacttcaacttcagttgacagtgcaaataaaacaatatcc
agcacctcagacttttccattgatccgctgatattcgaaccgaccaatgagagtcttgga
aatatatttgataatgacccagccttaattgtagatgacttagcatctgaaagttgtttg
ttatccaacaattttactgagcaatcttcaacatcattagcaacaccgaaaacaactgaa
gctttgcaagttcagtcagtctactccatatccccaaaacttacaaaaaaagtaaagctt
tttaacgagaggtcacccccagaaatgaataaaaattatttactgccaactagtgttgat
aaaaaccttgtcccatctttttcatcatcgctgttcaacgagcgtcacaccaagccgtca
gtttacacctgcaaagaatgtttgaaatattttacaaatataacagatgcttttcatcat
tgctatacggaacatcaacaaagtaaaaaaagtttggatatttcaaaccggttgcttgat
acaaagagtcacagttgccaacattgtggacggatatttaacaacaaaaacaacctgaag
cgtcatatattgatcaagcacacggcggacaagagatttaaatgtagccattgtggaaga
agatatgcaattcgacagtctcttcaatatcatatcaagtccgttcataataaaagtatc
aatgacataacagtggacagtccccaaacctcttcgttgatgatggaaaattttagttcc
ctgctcgccgcacctactgttgcccatcccacaagcagtttaacattttcaagctctgtt
gagttgaatgaggatgttttaaatgaagcggaaacatttgcaagcacttgcacgacttca
tatttgaaccaaattactacaatagataaccttccaccaaaacccagttgtaaactaccc
accatacaacatattgaaagtatccgctcacccggagtttcactacctgatgatattttg
gttgaaacgggaatgaaaacttctgtaaaaaccaaatcaactgcatcttatcaaggaggt
tctccatttgtactatccgaatcatcaaagctgcctgctttacttccagcattgccagaa
gatcaaaagaaaagtcccggagattttcatcaaataacttcccaccgtgttgcagcaaag
ttgcatcgttgcgatcattgcggacacatatttcccaccgtgcaagcttttactcgtcat
aaaagagcttgtaataaatatgaatgccctatttgtcacagaggattttcacaggttgga
aatatgagaagacatatgaaaatttttcattctgatcaaaaaccatttgaatgtaaggtg
tgcaataaagcttatggaatccaacaaagttttcgataccatatgcgtgacaagcatggc
ataatactgggcaagcctaattcaaaagcagaagaaaaataa
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