Ciona intestinalis (yellow sea squirt): 108949293
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Entry
108949293 CDS
T01056
Name
(RefSeq) fanconi-associated nuclease 1-like
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108949293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cin03400
]
108949293
Enzymes [BR:
cin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
108949293
DNA repair and recombination proteins [BR:
cin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
108949293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_HTH
Fan1_SAP
FAN1_TPR
Motif
Other DBs
NCBI-GeneID:
108949293
NCBI-ProteinID:
XP_026694574
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MKGAIQKYFAPCNNNSQVTKHKRSRSNDVIEISSDDDFKPKIEKRKRKLRKSDGKQTKSP
KLKNGHSSAAAKKTTIKTPSLLDHGVTSNKDIVELVKTEVIDLDLEPETSPKKGENVSKP
FKTIKQGKLQSEDCKSVEGASITAQKNFLKMNLSQKSQSKTDNKKLGDNTGQKVGDLSNN
TEKVGGKESVGKRAYYLENFEMVVNSVQQNRDDWRLFEGEDQSCVNMFQQLHVNARKLYV
RLFNRKYAWLPINKISYPEISPNPCPYLEMLASHDFLQSSMNEILSLQEILGLLSAPDVK
VLAKSFRLSVQGPKPKICDAIESMCKKQKSVFTTSSGQLTSTVTKQALSLLGTCYRINRN
VKKVFNRLLLVFDVTKGTEDDTDFTISIHSSNNLQHRKHQQLSAVLMEGMGRVAYPRYEV
NRPTPIFGNRDELLEYEIAYQFLIDAISASDVSQWKVADDVCTQATERTPPTPCNKQLPV
FLRCFTAQAVYVKVQSLHVSLLY
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtgcgatacagaaatacttcgctccttgtaataataactctcaagtcacgaaa
cataaaagatcccgaagtaatgacgtcattgaaatatcgtccgatgacgatttcaaacca
aaaattgaaaaacgtaaacgcaagttgcgtaaatctgatggaaaacagacaaaaagcccc
aaattaaagaatggacattctagtgctgctgccaaaaaaactacaattaaaacaccaagt
ttactagatcatggggttacatctaacaaggatatagtggaattggtaaagacagaagta
attgaccttgacttggagcctgaaacttcacccaaaaagggtgaaaatgtttccaaacct
ttcaaaactataaagcaaggcaaactgcagagtgaagattgtaaaagtgtcgaaggtgct
tctattactgcacaaaaaaactttttaaaaatgaatctatctcaaaaaagtcaatctaaa
actgacaataaaaaacttggtgataacacagggcaaaaagttggggatttaagtaacaat
acagagaaagttggtggaaaggaaagtgttgggaagagagcttattaccttgaaaacttt
gagatggttgtgaatagcgttcaacaaaacagggatgattggagattatttgaaggcgaa
gaccagagttgtgtcaatatgtttcaacaactgcatgtgaatgcaaggaaactttatgtc
agattgttcaataggaaatatgcatggttgcctattaataagatatcgtaccccgagatc
tcacccaacccatgcccttatttggaaatgttagcttctcatgactttctccagtcgagc
atgaacgaaatattatccttgcaggaaatcctgggtttattatctgcccctgatgttaaa
gtattggcaaagtcattcagactttcggtccagggaccaaagcctaagatttgcgatgct
attgaatcaatgtgtaagaaacagaaaagtgtcttcacaacatctagtggccaactaaca
tcaactgttacgaaacaagcgttaagtttacttgggacgtgttacaggataaatagaaat
gtaaagaaagtattcaacagacttcttcttgtgtttgacgtcaccaagggaacagaggac
gacactgacttcacaatatccatacattcaagtaataacctccaacatagaaaacatcaa
caattatcagctgtgcttatggaaggaatgggaagggttgcatatccacgatacgaggtg
aaccgacccacccctatatttggaaacagggatgaattattggagtacgagattgcttac
cagtttcttatcgatgcaatatctgcgtctgatgtttctcagtggaaggtagcggatgac
gtttgtacacaagctactgaacgcactccacctaccccatgtaacaaacaactaccagta
ttcctgagatgtttcactgcgcaagctgtttatgttaaggtacaatcactacatgtaagt
ttattgtattga
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