Ciona intestinalis (yellow sea squirt): 108949444
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Entry
108949444 CDS
T01056
Name
(RefSeq) rac guanine nucleotide exchange factor B-like
KO
K20526
transgelin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
108949444
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
108949444
Membrane trafficking [BR:
cin04131
]
Others
Actin-binding proteins
Others
108949444
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
108949444
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CH
Calponin
HHH_RecD2
DUF4074
Motif
Other DBs
NCBI-GeneID:
108949444
NCBI-ProteinID:
XP_018667130
UniProt:
H2XQR2
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All DBs
Position
4:5118978..5123873
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AA seq
408 aa
AA seq
DB search
MANRPKGYGYSREVASKIDAKYSEEDEMEVVAWVSSLVQSSPEQAGKEGFHAWLQDGQVL
CQLMNVLQAGICKPNPTYTGSMQAMKRNKEMENIGMFLSAAAKYGVKSEDQFQTVDLYEG
GNLGQVQATLYKLSSVAMKNGMGEGIGVKIADENKRNFDEQKTREGRNIIGLQMGTNQVA
SQRGMTAYGLGRQLTPQKLNQPTSTMANRPKGYGYSREVASKIDAKYSEEDELEVVAWIS
SFVQSSPDEEGKEAFHAWLKDGQVLCQLMNVLQNGSCKPNQPYTGTMQAMKRNKEMENIG
MFLSAAAKYGVKSEDQFQTVDLYEGGNLGQVQATLYKLSSVAMKNGMGEGIGVKIADENK
RNFDEQKTREGRNVIGLQMGTNQVASQGGMTPYGLGRQLTGPNLNSTK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccgaccaaagggatacggatactctcgggaagttgcttctaagattgatgca
aagtactccgaagaagacgaaatggaagtcgtggcttgggtcagctcccttgttcaaagt
tcgccggaacaagcaggaaaagaggggttccacgcctggcttcaagatggccaggttctt
tgccaactaatgaatgtattgcaggctgggatctgtaagcccaacccaacttacacgggc
tcaatgcaggcgatgaaacggaacaaagagatggaaaatatcggaatgtttctttcagca
gcagcaaaatacggtgtcaaatctgaggaccaatttcaaacggttgatttgtacgaaggt
gggaacttgggacaagttcaagccactttatataagcttagttcagtcgccatgaagaac
ggaatgggtgaaggcatcggtgtgaaaatagcagatgaaaacaaacgtaattttgacgaa
caaaaaacgcgtgaaggaagaaacatcattggtttacagatgggcacgaaccaagttgct
tcccaaagaggcatgacagcttatggactcgggcgacaattgactccgcaaaagttaaac
caacccacttctacaatggcaaaccgaccaaagggatacggatactctcgagaagttgct
tctaagattgatgcaaagtactccgaggaagacgagttagaagtcgtggcttggatcagt
tcgtttgttcaaagttcgccagatgaagaaggaaaagaggcttttcacgcttggctgaaa
gatggtcaggttttgtgtcaactgatgaatgtgttgcagaatggtagctgtaaacccaat
caaccttacacgggcacaatgcaggcgatgaaacggaacaaagaaatggaaaatatcgga
atgtttctttcagcagcagcaaaatacggtgtcaaatccgaggaccaatttcaaacggtt
gatttgtacgaaggtgggaacctgggacaggttcaagccactttatataagctcagttca
gtcgccatgaagaacggaatgggtgaaggcatcggtgtgaaaatagcagatgaaaacaaa
cgtaattttgacgaacaaaaaacgcgtgaaggaagaaacgttattggtttacagatgggg
acaaatcaagtggcttcgcaaggcggcatgacaccttatgggctgggtcggcagctgact
gggccaaacctgaacagcacaaaataa
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