Ciona intestinalis (yellow sea squirt): 108949689
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Entry
108949689 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC108949689
KO
K23209
DNA transposase THAP9 [EC:2.7.7.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
108949689
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Gene silencing
Transposable elements
108949689
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
TNP-like_RNaseH_N
TNP-like_GBD
Tnp_P_element
Motif
Other DBs
NCBI-GeneID:
108949689
NCBI-ProteinID:
XP_026691534
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All DBs
Position
8:887792..892080
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AA seq
487 aa
AA seq
DB search
MFYSKDKWSFCYRFGNFMAEMHSQNSVEPIISVCIAVDVTVSWISFHGWRVDPSHLSLPD
IRISTLNYFLEEVMKFKLCEGIDEKYSTRNTKLHHLQNWNGNCLSARTLTRSPLCQVAFL
GDEQCSQCTKYQYKSKCNKKYCDRKREVSEEELVDIDDSLHSDFMDLLHSESGDMNEWQQ
MFFREQIQNSRKSAYCRRYHPDVVRWAIELYSRSPSAYQHLITTDVLKLPSSRTLQKFRN
IGTNEPGLNQIAVEAMKNLKFPVEAYLTVDEMKVKESLVYKDGRLVGFVDFGDRYTQTKI
ATHICMFYIRSLKKEISMPLSWWPTTTTPAYQLASTFWDLVGTCEMNSVHVNAIVADAAS
VNRKFFNHIYGGTYSLSRAVYTAPNPYRPSHPIFILSDPSHLLKTTRNGLYSSKPGGTKF
FAKSGRDILWTHIQNLYNLESKSVLHKTRLSNVHVDLNSYSKMNVSLARQNSPLGCRKGS
AARYTKF
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttctattccaaagataaatggtcattttgttatcggttcggaaattttatggctgaa
atgcattcacaaaacagtgtggaacccattatcagtgtttgcattgctgtggatgtgaca
gtgagttggatatcatttcatggctggcgtgttgatcccagtcatctttccttgcccgat
atcaggatttctacattaaattattttttggaagaagtgatgaagtttaaactttgtgag
ggtattgatgaaaaatactcaactcggaacacaaagcttcatcacctacaaaactggaat
ggaaactgcctttcagcaaggactcttacacgttctccactctgtcaagtagcattttta
ggcgatgaacaatgttctcaatgtacaaaataccagtacaaatccaaatgcaacaagaaa
tattgtgaccgcaaacgtgaggtgtcagaggaggagttggttgatatcgatgacagcttg
cactcagacttcatggacctacttcactcagagagtggagatatgaatgagtggcagcag
atgttctttcgtgaacaaatccagaattccaggaagtctgcatattgtcgtcgatatcat
ccagatgttgttagatgggcaatagagttatattctcgttcgccttcggcctatcaacat
ttgattacgaccgatgtgctaaagcttccatcgtcacgaactcttcaaaagttcagaaat
atcggaacaaatgaaccaggactaaatcaaattgctgtggaagctatgaaaaatcttaaa
ttcccagtagaggcttacctaaccgtggatgaaatgaaagtcaaagaaagcttggtatat
aaggacggtcggttggttgggtttgttgattttggtgaccgttacacgcaaacaaagatt
gcaacacacatttgcatgttttatatacgatcactaaaaaaagaaatttcaatgccatta
tcatggtggcccacaactaccacccctgcttatcagttggcttccacattctgggacctt
gttggcacttgtgaaatgaacagtgttcatgtaaatgcaattgttgctgatgcggcctca
gttaatcggaagtttttcaaccatatatatggaggaacgtactcgttgagcagggctgtt
tatactgcaccaaacccataccgaccaagccatccaatttttattttaagtgatccaagc
catttacttaagacaactcggaatggtttgtactcatccaagcctggtggtactaagttt
tttgctaaatctggacgggatattttatggacacacattcaaaacttgtacaacctagaa
tcaaagagtgttcttcataaaacccggctttcaaatgttcatgtggatttaaattcatac
tctaagatgaatgtatctcttgctcgccaaaactctccgttgggatgtaggaaaggctct
gcagcaagatataccaaattctga
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