Ciona intestinalis (yellow sea squirt): 108950299
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Entry
108950299 CDS
T01056
Name
(RefSeq) protein SOGA3-like
KO
K27704
microtubule cross-linking factor
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
108950299
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
108950299
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
AvrM-A
Herpes_UL6
Motif
Other DBs
NCBI-GeneID:
108950299
NCBI-ProteinID:
XP_018671235
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All DBs
Position
1:8403002..8407328
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AA seq
969 aa
AA seq
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MFWSNTSVSMADTTMHSCSCVSGCRCSTLNKDTVDMTARSTDGTIVTYSKDTDEVKSRPG
SPKMGKVRSNVTKPTTSESDNIAGCSLFKSKPAVGGRVKEGTAFHVLQPHSHKRHYQQHM
LDHFTSQDFLRKQERLPRRAVWTELAPVTTVCEYKDTNFLTQTTSEEQRRASHPQTRPTS
SRGRLGRFTQESRDGIFTTGHFAADPQMELLHKGTVLNIDNIKLKNEIDQKSAKPITLVS
SIYQGNTGTKTRRAADARKHDCSFYRGKPTRHKFHKSLVMNYPKFGQPLQNRGGYCQTSK
TRGKNRRSIASLTEMQQMVNVTLVDVATQTYSLTENIETVKPTTDYVVPTSTGLSFELSD
IQNSSFSASSTPLTSPTSSASELLADEPIFEKKEDFPECAVQQERVKPITSKQELKQRMS
KNRKDMQSLRSYVFSLETHHPELKLPFLAVLNELEQVSAEGYELYDEFDDFPNEDRIEVM
RLSKEVRAYKRACKVLEYQVRKFEQRPENCDDEIGRLADEVKLSRHVAVSLHYELQAAEK
KLQKLLSENEDCRVKVIGAETRIEVLEKEDRRLRNAVDQLSLHASSTTTSCDVLEFDKNS
IRELKIKLQFKEEEIKSVLLRLARTEKEVEKYKEHHGKCKVATATSGEGEKTEGFVQHSE
LKLKLNDDQATALGRRVIALELENESLGKQLRDALDRSSDTSRRPSSSDLQFLEDEVEVL
RNAVHDLEDENFILKTRLVELKHQLSQKSDELEKEKSRKTSPLKEGEPSISEETLSEHTI
SNRDFNTSSLNIAPRYMAIDEGTQTFPPAPKSLPSPSPVKETFSESRSLVQEISYILSHT
ENVEEVVCELRQLALATRHLLNQSPCRQRQQPQEFQSSLKLVVADSVLQPVDISDDENED
EEIEFKVGATPTAPLIAPHQVTEFSTSPNPDFRVHDYIVTSLIVYILVTTLPILTSFKLL
FLLILFFIV
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgttctggtccaacacaagcgttagcatggcggacacgaccatgcactcgtgttcttgc
gttagtggttgccggtgctcgacactgaacaaagacacggtggatatgacggcacgaagc
acagacgggacgattgttacttactcgaaagatacagacgaggtgaagtcacgcccaggc
agcccgaagatgggaaaagttcgttcgaatgtgactaaaccaacgacctccgaatccgat
aatatagctgggtgttctttatttaaatctaaacctgctgtaggaggtagggttaaagaa
ggtacggcttttcatgtcctgcagccgcactcgcacaagcggcattaccagcaacatatg
ctggaccatttcacgtcgcaagattttctccgcaagcaggagcgccttcctcgtcgagca
gtgtggactgaactagcacctgtaacgacagtttgcgaatacaaagacacaaactttctc
acacagacgacctccgaggagcagcgacgagcaagtcacccccaaactcgccccacctct
tcgcgtggtcggttgggccgcttcacgcaagaaagcagagacggcatttttaccaccggc
cactttgccgccgacccccaaatggaattactacacaaaggcactgtgttgaatatagac
aatataaaattaaaaaacgaaatcgaccaaaaatctgcgaaacctataacccttgttagt
tcaatttaccaaggaaacactgggaccaaaacgcgtcgtgctgcagatgcacgaaagcac
gattgctcattttatcgaggaaaacctacccgacacaaatttcacaaaagcttggtgatg
aattatccaaagtttggacaacctttgcaaaatcgtggaggttactgccagacaagtaaa
actagaggcaaaaatagaagatcaattgcatctctcactgaaatgcagcaaatggtaaac
gtcacgctcgttgatgttgccacacaaacttattcattaactgaaaacatagaaacagta
aaacctacaacagattatgttgtccctaccagcacggggctcagttttgagctttccgac
attcagaattcttcgttctctgctagcagcacgcctctcacatcacctacgtcatctgca
tctgaactgctagccgatgaacctatatttgaaaaaaaagaagatttccctgaatgtgct
gtccaacaagagcgcgtcaaaccaattacttcgaaacaagagttaaagcaacgaatgtcg
aagaaccgaaaagacatgcagagcttgcgttcgtacgtgttttctttggaaacgcatcac
ccggagctaaaacttccatttttagcagttcttaacgagctggagcaagtgtctgctgaa
gggtacgaactttatgatgagtttgacgactttcccaacgaggatagaatcgaagtgatg
cgactaagtaaagaagttcgggcgtacaaacgagcgtgcaaagtgctcgaataccaagtt
cgtaaatttgagcagcggccagagaactgcgacgacgaaataggacggctcgcagacgag
gttaaactaagtcgacacgttgccgtatctttgcattacgaactacaagccgctgaaaag
aagttacaaaagttgctatccgaaaacgaagactgtagagtgaaggtaattggtgctgag
accagaatagaagtcttagaaaaagaagaccgtcgtcttagaaatgctgttgaccaatta
agcttacatgcgtcttctactacgaccagttgcgatgttcttgaatttgataaaaattcg
atacgagagctgaaaataaagcttcagttcaaagaggaagagattaagtccgttctgttg
agacttgcccggacagaaaaagaggttgaaaaatacaaagaacatcacggaaagtgtaaa
gtagcgacagccacttcaggcgagggggaaaaaacggaaggctttgtacagcacagcgaa
ctaaagcttaaattgaatgatgatcaagccactgctctgggacggcgggttattgcactg
gaactggaaaacgaaagtttaggaaaacaactgagagatgccctggataggagcagtgat
acttcgagaagaccgagttcgagtgatcttcagttcttggaggacgaagtggaagtactc
cggaacgcggtacatgatctggaagatgaaaacttcatcttgaagactcgtctggttgag
ctgaaacatcaactttctcaaaaaagcgacgaactagaaaaagagaagtctcggaaaacg
tcaccactgaaagaaggagaaccttcaatatccgaagaaacattaagcgagcatacgatt
tcaaaccgggattttaacactagctctttgaacatcgcaccgagatacatggctattgac
gaaggaacgcagacttttccacctgcccctaaaagccttcccagtccatctccagtgaaa
gaaaccttcagtgaaagccgatctttggttcaagagatctcttacattctcagccacacg
gaaaacgtggaagaggttgtgtgtgaactgcggcaactggcgctcgcaacccgccatctg
ctcaaccaatctccgtgccgacaaagacaacaaccccaagaattccaatcgagtttgaaa
cttgtcgtcgctgactctgtactccagccagtggatatttcggatgatgaaaacgaagac
gaagaaatagagtttaaagttggagcgacaccgacagctccattgatagctccacatcaa
gtcacagaattttccacaagccccaatcccgatttccgtgttcacgattacatagtaaca
tcattgattgtgtacatactagttaccaccttacccatcttaacttctttcaaattatta
tttcttttgattctgttcttcattgtgtaa
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