KEGG   Ciona intestinalis (yellow sea squirt): 108950299
Entry
108950299         CDS       T01056                                 
Name
(RefSeq) protein SOGA3-like
  KO
K27704  microtubule cross-linking factor
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cin03036]
    108950299
Chromosome and associated proteins [BR:cin03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     108950299
SSDB
Motif
Pfam: SOGA AvrM-A Herpes_UL6
Other DBs
NCBI-GeneID: 108950299
NCBI-ProteinID: XP_018671235
LinkDB
Position
1:8403002..8407328
AA seq 969 aa
MFWSNTSVSMADTTMHSCSCVSGCRCSTLNKDTVDMTARSTDGTIVTYSKDTDEVKSRPG
SPKMGKVRSNVTKPTTSESDNIAGCSLFKSKPAVGGRVKEGTAFHVLQPHSHKRHYQQHM
LDHFTSQDFLRKQERLPRRAVWTELAPVTTVCEYKDTNFLTQTTSEEQRRASHPQTRPTS
SRGRLGRFTQESRDGIFTTGHFAADPQMELLHKGTVLNIDNIKLKNEIDQKSAKPITLVS
SIYQGNTGTKTRRAADARKHDCSFYRGKPTRHKFHKSLVMNYPKFGQPLQNRGGYCQTSK
TRGKNRRSIASLTEMQQMVNVTLVDVATQTYSLTENIETVKPTTDYVVPTSTGLSFELSD
IQNSSFSASSTPLTSPTSSASELLADEPIFEKKEDFPECAVQQERVKPITSKQELKQRMS
KNRKDMQSLRSYVFSLETHHPELKLPFLAVLNELEQVSAEGYELYDEFDDFPNEDRIEVM
RLSKEVRAYKRACKVLEYQVRKFEQRPENCDDEIGRLADEVKLSRHVAVSLHYELQAAEK
KLQKLLSENEDCRVKVIGAETRIEVLEKEDRRLRNAVDQLSLHASSTTTSCDVLEFDKNS
IRELKIKLQFKEEEIKSVLLRLARTEKEVEKYKEHHGKCKVATATSGEGEKTEGFVQHSE
LKLKLNDDQATALGRRVIALELENESLGKQLRDALDRSSDTSRRPSSSDLQFLEDEVEVL
RNAVHDLEDENFILKTRLVELKHQLSQKSDELEKEKSRKTSPLKEGEPSISEETLSEHTI
SNRDFNTSSLNIAPRYMAIDEGTQTFPPAPKSLPSPSPVKETFSESRSLVQEISYILSHT
ENVEEVVCELRQLALATRHLLNQSPCRQRQQPQEFQSSLKLVVADSVLQPVDISDDENED
EEIEFKVGATPTAPLIAPHQVTEFSTSPNPDFRVHDYIVTSLIVYILVTTLPILTSFKLL
FLLILFFIV
NT seq 2910 nt   +upstreamnt  +downstreamnt
atgttctggtccaacacaagcgttagcatggcggacacgaccatgcactcgtgttcttgc
gttagtggttgccggtgctcgacactgaacaaagacacggtggatatgacggcacgaagc
acagacgggacgattgttacttactcgaaagatacagacgaggtgaagtcacgcccaggc
agcccgaagatgggaaaagttcgttcgaatgtgactaaaccaacgacctccgaatccgat
aatatagctgggtgttctttatttaaatctaaacctgctgtaggaggtagggttaaagaa
ggtacggcttttcatgtcctgcagccgcactcgcacaagcggcattaccagcaacatatg
ctggaccatttcacgtcgcaagattttctccgcaagcaggagcgccttcctcgtcgagca
gtgtggactgaactagcacctgtaacgacagtttgcgaatacaaagacacaaactttctc
acacagacgacctccgaggagcagcgacgagcaagtcacccccaaactcgccccacctct
tcgcgtggtcggttgggccgcttcacgcaagaaagcagagacggcatttttaccaccggc
cactttgccgccgacccccaaatggaattactacacaaaggcactgtgttgaatatagac
aatataaaattaaaaaacgaaatcgaccaaaaatctgcgaaacctataacccttgttagt
tcaatttaccaaggaaacactgggaccaaaacgcgtcgtgctgcagatgcacgaaagcac
gattgctcattttatcgaggaaaacctacccgacacaaatttcacaaaagcttggtgatg
aattatccaaagtttggacaacctttgcaaaatcgtggaggttactgccagacaagtaaa
actagaggcaaaaatagaagatcaattgcatctctcactgaaatgcagcaaatggtaaac
gtcacgctcgttgatgttgccacacaaacttattcattaactgaaaacatagaaacagta
aaacctacaacagattatgttgtccctaccagcacggggctcagttttgagctttccgac
attcagaattcttcgttctctgctagcagcacgcctctcacatcacctacgtcatctgca
tctgaactgctagccgatgaacctatatttgaaaaaaaagaagatttccctgaatgtgct
gtccaacaagagcgcgtcaaaccaattacttcgaaacaagagttaaagcaacgaatgtcg
aagaaccgaaaagacatgcagagcttgcgttcgtacgtgttttctttggaaacgcatcac
ccggagctaaaacttccatttttagcagttcttaacgagctggagcaagtgtctgctgaa
gggtacgaactttatgatgagtttgacgactttcccaacgaggatagaatcgaagtgatg
cgactaagtaaagaagttcgggcgtacaaacgagcgtgcaaagtgctcgaataccaagtt
cgtaaatttgagcagcggccagagaactgcgacgacgaaataggacggctcgcagacgag
gttaaactaagtcgacacgttgccgtatctttgcattacgaactacaagccgctgaaaag
aagttacaaaagttgctatccgaaaacgaagactgtagagtgaaggtaattggtgctgag
accagaatagaagtcttagaaaaagaagaccgtcgtcttagaaatgctgttgaccaatta
agcttacatgcgtcttctactacgaccagttgcgatgttcttgaatttgataaaaattcg
atacgagagctgaaaataaagcttcagttcaaagaggaagagattaagtccgttctgttg
agacttgcccggacagaaaaagaggttgaaaaatacaaagaacatcacggaaagtgtaaa
gtagcgacagccacttcaggcgagggggaaaaaacggaaggctttgtacagcacagcgaa
ctaaagcttaaattgaatgatgatcaagccactgctctgggacggcgggttattgcactg
gaactggaaaacgaaagtttaggaaaacaactgagagatgccctggataggagcagtgat
acttcgagaagaccgagttcgagtgatcttcagttcttggaggacgaagtggaagtactc
cggaacgcggtacatgatctggaagatgaaaacttcatcttgaagactcgtctggttgag
ctgaaacatcaactttctcaaaaaagcgacgaactagaaaaagagaagtctcggaaaacg
tcaccactgaaagaaggagaaccttcaatatccgaagaaacattaagcgagcatacgatt
tcaaaccgggattttaacactagctctttgaacatcgcaccgagatacatggctattgac
gaaggaacgcagacttttccacctgcccctaaaagccttcccagtccatctccagtgaaa
gaaaccttcagtgaaagccgatctttggttcaagagatctcttacattctcagccacacg
gaaaacgtggaagaggttgtgtgtgaactgcggcaactggcgctcgcaacccgccatctg
ctcaaccaatctccgtgccgacaaagacaacaaccccaagaattccaatcgagtttgaaa
cttgtcgtcgctgactctgtactccagccagtggatatttcggatgatgaaaacgaagac
gaagaaatagagtttaaagttggagcgacaccgacagctccattgatagctccacatcaa
gtcacagaattttccacaagccccaatcccgatttccgtgttcacgattacatagtaaca
tcattgattgtgtacatactagttaccaccttacccatcttaacttctttcaaattatta
tttcttttgattctgttcttcattgtgtaa

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