Ciona intestinalis (yellow sea squirt): 108951031
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Entry
108951031 CDS
T01056
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain containing-NOGO receptor-interacting protein 4
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
108951031
Membrane trafficking [BR:
cin04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
108951031
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
Ig_3
I-set
Ig_2
ig
LRR_9
LRR_EndoS
V-set
LRR_At5g56370
LRR_LRWD1
LRRNT
Izumo-Ig
DUF485
Motif
Other DBs
NCBI-GeneID:
108951031
NCBI-ProteinID:
XP_026696518
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All DBs
Position
2:4116192..4121193
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AA seq
598 aa
AA seq
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MALKDHQQNGSVCLWSLVMVIYLIVQSRWISLTEADTIRCPSVCLCDNKEKFVMCQEKNL
SHLPFPLPSETHILGLSQNHFTGLTSSMFIDTGLEESLQSLVLYDNRIASIEPGSFLGLQ
KLSNLWLFGNQLTTLEKGTFEGMNKLAELDLSRNYLVNIEDGTFDGLKKLEVLHLWGNKL
KTLHTNAFQGLNSLSNLSLGDNKFEAVPSNAFPHLTNLSSLELLNLPIEKLQASAFVGLS
NLKRLHIGDWPLTQIDEAAFAGLDNLRYLSLYRCNLIKVPQPQLSFLPHLKHLVLSNNKN
IRSLKRDDFQGNLELEDLFLSNIGLSTIHESPFHLLTSVKNLDLSVNKLSVLPSHAFLQM
EHLHSLNLSHNSIQSLSYPLFIPLSVLNNVDLQGNPLVCDCDIKWLRLLREMRIKEQFTL
KGQCSDPSILAGKDIITLQTSKFICQAPVFHKNKTVIARIGSNVSLSCQPDEGVPTPKSI
WTIKQTDHSTHLVTKKDGTLFITKVKTSDYGAYTCEASNKLGSADLTVFLVEHVPVAQTS
GGATTGILVGLTVIVVLVSVVVLYRRYGKGKFGSSLYDAMLGETENQRLSMKGLSKGA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcactgaaagaccaccaacaaaatgggtctgtatgtttatggagtttagtgatggtc
atttacttaatagttcaaagcagatggatttcattaacagaagctgacacaattcgatgt
ccttctgtatgcttgtgtgacaataaagaaaagtttgtaatgtgccaagaaaaaaacctg
tctcatctgccttttccattaccgagtgagacacatattttgggattgtcccaaaatcat
ttcactggactgacaagcagcatgtttattgatactggattagaagaaagtctacaatcc
ttggttctgtatgataaccgcatagctagtatcgaacctggcagtttcttgggcttacaa
aaactctctaatctctggctttttggaaatcagttgaccacgcttgaaaagggaacattt
gaaggaatgaataagctagcagaactagatttaagcaggaattacttagtgaatattgaa
gatggtacgtttgatggtttaaaaaagttggaagtgctacatctttggggtaacaaactg
aagacgctgcacacaaatgctttccaaggactgaacagtctttctaatctctctttaggt
gataacaagttcgaagcggttccatctaatgcattcccccaccttaccaatctaagctcg
ctggaattactgaaccttccaattgagaaactacaagcgagtgcattcgttggtttgagc
aatttaaaaagactgcatattggagactggccactcacacaaatagatgaagcagcattt
gcaggacttgacaacttacgttatctctcattatatcgatgtaatttgataaaagttccc
caacctcaactttcatttctaccacatctcaaacatcttgttttaagcaacaacaaaaat
attagaagtttaaagcgggatgacttccaagggaatctggaattagaagaccttttttta
tccaacattgggcttagcacaatacatgagagtccatttcatttgcttacttcagtgaag
aatttggatttgtcagtgaataaactgtctgtactaccatcccatgcattcttacagatg
gagcatctacattctctaaatctttcccacaattcaattcaaagtctgtcatatcctctg
ttcattccactaagcgtgctgaacaatgtggacttgcagggcaacccactggtttgtgac
tgtgacattaaatggttgagattgcttcgggaaatgcgaataaaagagcagttcacactg
aaaggccaatgcagtgacccttctatactggcagggaaagacattataacattacagacc
agcaagttcatttgccaagctccagtgtttcataaaaataaaacggtgattgcaagaatt
ggctccaatgtatcgttgtcatgccaaccagatgaaggggtgcccacacctaagtcaatt
tggacaataaagcagacagaccactcaacgcatctagttacaaagaaggatggaacgctc
ttcataaccaaagtaaaaacatcagattacggtgcttacacatgcgaggcaagcaataaa
cttggaagtgctgatcttactgtgtttctagtggagcatgtaccagttgctcaaacaagt
ggtggagcaacaactggtatattggtgggtcttactgtcattgttgtacttgtatcagtt
gttgtgttgtacagacgttatggtaaaggaaagtttggaagtagtttatatgatgcaatg
ttaggggaaacagagaaccagcgactttccatgaaaggtttatcaaaaggagcataa
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