Ciona intestinalis (yellow sea squirt): 108951058
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Entry
108951058 CDS
T01056
Name
(RefSeq) vasorin-like
KO
K24500
vasorin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cin04990
]
108951058
Domain-containing proteins not elsewhere classified [BR:
cin04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
108951058
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRRNT
LRR_14
LRR_9
LRR_NXF1-5
LRR_LRWD1
EGF_DL_JAG
YajC
Holin_BhlA
Motif
Other DBs
NCBI-GeneID:
108951058
NCBI-ProteinID:
XP_018673264
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Position
2:complement(4339263..4366003)
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AA seq
921 aa
AA seq
DB search
MTTWATTYLALVMLLVAKMTSSTMTCPRLCSCHSREVWCENQGLTEIPVGIPVDTRKLYL
FDNNITTIPEGSLSRLKGLQFLVLTSNGLTNDAIRPGLFSQLKELEVLILSNNKLTTITN
DMFAGMPKLVRLYIEKNRLRTIAPKALFNMTKLVELKLSGNQLTNFPKIKSCPKLRRLSL
NNNKLARLQFDSLSEVNLEELELSSNRLTQLPSTTFRDMSNFGVLDLSLNRIRRLPRIIK
NMTSLHSLNLSCNSISFLPPDLLQSLRKIKVLDLHDLRLSSLSESFIPRGVLFNVADFSM
NPWRCDCDLSWLPNIMRAIPGAFINVDSVQCATPVRWQHRKLNSLYDHDLKCNRGPSLPP
RDKDTASHPHRPTVDLCDGIVCANGAPCYINNTTNRPVCRCPPHWTGMLCDHWKALPTPP
TSTTTTTTLAARAPSGNVPHLIIQSDTITPNSVGIILPSTGRSLKVTVTEILAGRKSTPN
EYTIVPTTHPYTVNDLEAGKKYNICITSSDIIRSTGGRDKIVTDTLCGEVTTLNLPASGS
PDETTKDYDSNYVEPDKVENKVIPPPTVVDAPVVDPGDDEKQTGDTNPSVDTQHDFPLLY
PALGAGLGAFVILVVAILFFVCYKNKKKQKKQANNNDSIKPSEYSRGRPSNGICDPDMIP
MMMQQVPRPTVTTSMVTPQGEIYQHPPHNHTQNGAIQPLRVSTPNKNGSLGRSSNSGGSV
CGAPMSQPGEIQRGYSPGSNVSHTVPKDGLEEPRYVTSPNCALSYPSNGGVYSTQIPYTT
TQQPPPHTNRGHEFLYRAHPGSLAAETIAETRYGETQGLVPRPTCTTVNHYHHSPIATTM
GPDYAYQQHVNGLVTGYSQPTVPQITRSPVRYTPSTQMGSGVRFPDQRVGHLSLDRYGPA
ITSGHMIDPNMSPAFHDTLVM
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgtgggctacgacgtacctggctctagtgatgttgcttgtcgcgaagatgacg
tcatcaacaatgacgtgtccgagactgtgtagttgtcactcgcgggaagtttggtgcgaa
aatcaaggtctgactgagataccggtcggcataccggtggacacaaggaaactttatctc
ttcgacaacaacattaccaccatccccgaaggatcgctgtcgcgtctaaagggtctgcag
tttttggtgttaacgtcaaacggcctcacgaacgatgcgatccgacctgggttgttctcg
cagttgaaggagcttgaggtgttgatactttcaaacaacaaactcaccaccattaccaac
gacatgttcgctggtatgccgaaactggtcaggctctacatagagaagaaccgactgcga
accatcgcaccgaaggctctttttaacatgacgaaactggtggagctgaaactgagcggg
aatcaactgaccaactttccgaagatcaaatcatgccccaaactccgcagactcagcttg
aacaataataaacttgcaaggctgcagttcgatagcttaagcgaagtcaatttggaagaa
ctagagttatccagtaaccgtcttacccaactgccttcaactacgtttcgagacatgagc
aactttggtgttttggatctaagtctcaatcggattagaaggttgcccaggataataaag
aacatgacttcgcttcattccctcaacctctcctgcaactccatcagctttcttcctccg
gatttgctccagagtttgcggaagatcaaggtcctggacctccacgatcttcgactctca
tcccttagcgaatccttcatcccaaggggtgtccttttcaacgtggcggacttttccatg
aacccgtggcggtgcgactgtgacctctcttggctgccaaacattatgagggccatacca
ggggcatttataaacgttgacagtgtgcagtgcgcaactcccgttaggtggcagcacaga
aagctcaactctttgtacgatcacgacctcaaatgcaacaggggacccagtttgccgccc
agagataaagacactgccagccatccgcacagaccgactgtggatctatgtgatggaata
gtttgtgctaacggcgccccatgttatatcaacaacacgacaaaccgcccagtctgcagg
tgtcctcctcactggacaggcatgttgtgtgatcattggaaagcattacccaccccaccc
acatccaccacgaccactacaaccctagctgcacgcgcaccgtcgggcaacgtaccgcat
cttataatacagagtgataccatcaccccgaactcagtggggataattctaccaagtact
ggacgatccctaaaagttacagtcaccgaaatccttgcgggtcgaaaatcgactccgaac
gaatatacgatcgttccgaccactcacccttacactgtaaacgatttggaggcaggaaag
aagtacaacatctgcatcacctcatcggacatcatccggagtaccggaggcagggacaag
atcgtgacagacacgttatgcggggaggtaacaaccttaaaccttccagcgagcggttct
cccgacgagacgacgaaagattatgattcaaattatgtggaaccggacaaggtagaaaat
aaagttattccaccaccgactgttgtcgatgctccagtcgtcgatccaggcgacgatgaa
aaacagacaggcgacacaaatccttcagtagatacccaacatgactttccgttgctttac
ccggcgctcggtgcggggttaggggcattcgtgatcctggtagtcgccattttgtttttt
gtctgctataaaaacaaaaagaagcagaagaagcaagcgaacaataacgactcgataaaa
ccgtcagaatacagtcggggccgaccgtccaacggcatctgtgaccctgatatgataccg
atgatgatgcagcaggttcctagaccgacagtaactacatcaatggtaaccccgcaggga
gaaatataccaacacccaccacataaccacacacagaatggggcaatacagccgctccgg
gtatctacaccaaacaaaaacggttctttgggacgcagcagtaactcaggcggaagcgtc
tgcggagcgccgatgtcgcaacccggtgaaatacagcgcgggtactcgcccggatcgaac
gttagtcacactgtaccaaaagatggcctggaggagccgcgatacgtcacaagtcctaac
tgcgcgctctcctatcccagcaacggcggagtgtacagcacccaaattccgtacactaca
acccaacaacccccgccacacactaaccgaggacatgagttcttataccgagctcaccca
ggcagcttagctgcagaaacaatcgcggagacgcgctacggggaaacccaagggctggtg
ccgaggccaacttgtacaacagtgaaccactaccaccacagccctatcgcgaccacaatg
ggaccggactacgcttaccagcagcacgtaaacggcttggtaaccggttacagccaaccc
acagtgccgcaaatcacgcgatctccggttcggtacacaccgtctacacaaatggggtcc
ggagttcgtttccccgaccagcgagtcggtcatctaagtttggaccgctacggtccagcg
atcacgagcggtcacatgatcgatccgaacatgtcacctgcgtttcatgacactttagtc
atgtga
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