Ciona intestinalis (yellow sea squirt): 108951065
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Entry
108951065 CDS
T01056
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1 homolog isoform X1
Organism
cin
Ciona intestinalis (yellow sea squirt)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
HTH_upst_double_PIN
Motif
Other DBs
NCBI-GeneID:
108951065
NCBI-ProteinID:
XP_026693311
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Position
1:complement(1132370..1146144)
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AA seq
1268 aa
AA seq
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MCPNNQSLPVTVCLDYSLNTLKCNASGWEHLILTFEPKHWNERTLEETKIEHISLHQAVK
NENLALLETELKVLQQFGQGKLVPKTKFKRKILALKINRKDIQGLTALHIAAQKDNTRMC
QLLYDYSKVSGESAPQLDIFIKDNKGATAIHYAAQGKFRNDDSKIEMVENEEYEPLKSVC
VNEETSLKKLLTWGNDKMLTEVKDDNGMTPLHWAAKHNNICAAVQLVTHFLKRNQCETSF
ITKCGPKAAPSKAAQLIDHQDNYGRTALLICAAHDKKDTAKLLVKSNADMKIKDGHGWTA
LHYAASEGNSYVCRLILQQAKDTQLLHELQHMVDGMNNTPLHVACEKGNLEAVELLLEYD
VGGNLLSKENQKGNTPLILAASIGGLDIIKLLLKGNVDVNHKNNEGKTALHFAARFNHTD
VLQYLVSRGANPRAEDGSRIIPIVLAAHYGSIEALYYLLENHGYCQFEDHMHKTCLHWAV
EANRLEVAKVLICHKLSSSSVGLKDPQGNTALHIASTLGYHHVVRLLLGKFDKKWKKCDR
GKLPIHLAAQNGHTEVIKIILDFDPGQICSRDKEGNTPLINAALNGKEDAAFCLVEQRAN
LDQQGPLFLQQQNSKYKITFCFSNSKQLTALSCCAMNDYTKTALHLLKAGASTAVQNSNG
ATPLHIACMEGSASMVKLLLKYDASVTARDGKGYNPLDLAIKYRHKACAKEIIQSSKWKA
ALRNMTVINEKTGLISTPLREMIKSMPDTADLVFNRCTVVSTDYDPEDDEFWVEFNFEFL
DDMYTSASWKQLHEAAGEMGLMVDTPHCFNEDRSMEKSCSSYSDTSHVLRDNHPLALIVN
HNSSQLLHHPLVLDLLSYKWSRYGRNIYYALLLVYFVFLSALSAYLLSIPPPYGVVIKGN
GSNVCFELKDGANAYWKREDCTCCQYGSRGDVFNTALSSVVLVVASLSLLKEVFQAWKSK
LAYFLSFDNYMEVASYSLAITAVLDWSEQTKLTGIKEDWQWQLAAICMLTSWLTLALFLR
KLPTLGIYVIMILDIVKTFAKFFATFLLFIIAFAYFFYMLLQNQAEFNTWWGSLIKTTVM
MIGEMDFSTIFYSDQDECSASNSTTCYSKTALFYPELTYSIFAFFLVLMPIIVMNLLVGL
AVDDIKSVQNQANDAKMGMQIQLALEVEFMLPQALQKHFVVGVHRIYPNKIHKQSTIKKF
LFNDKVVTAVLTNKWLSQLHDQEESRIEMKSKVAKQSESVKRKIKKLMKQCEELNENIRM
LARESLQE
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgtgtccaaacaatcaatcactgccagtcactgtttgtttggattattcactcaacaca
cttaaatgtaatgcatcgggttgggaacatttaatattgacctttgaacccaaacattgg
aatgaaaggacattggaagaaaccaagatagaacatatctctctacaccaggcagttaag
aatgaaaacctggcactgcttgaaacagagcttaaggttctacagcagtttggtcaaggg
aagctggtgccaaagacaaagttcaaaagaaagatattggctttgaaaattaaccgcaag
gacatacaagggttgactgcccttcatattgctgcacagaaagataacacaaggatgtgt
caactattgtatgattattcgaaagtatcgggagaatcagcaccccaacttgatatattt
ataaaggacaacaaaggagcaacagcaatacattacgcagcacaaggaaagtttaggaat
gatgattctaagatagagatggttgaaaacgaagagtacgaaccactgaagagtgtttgt
gtaaatgaagagacaagtctaaagaagttgttaacttggggaaatgacaaaatgttaact
gaggtaaaagatgacaacggtatgactcctttacactgggcagcaaaacacaacaatatt
tgtgctgctgtgcaacttgtgacacattttctgaaacgaaaccagtgcgagaccagtttt
ataacaaagtgtggacctaaagcagcaccttcaaaagcagcacaactgattgaccaccag
gataattatgggagaaccgctttacttatatgtgcggcccatgataagaaagatacggct
aaattactggtgaagtctaatgctgatatgaaaataaaggatggtcatgggtggactgca
ttgcattatgcagcttctgaaggtaacagttatgtgtgtcggttgattctacaacaagca
aaagacacacaacttcttcatgaacttcaacacatggtggatggaatgaataacactcca
cttcacgtggcttgtgagaaggggaacttagaagcagttgaattactcttggaatatgat
gtgggtggcaacctcctatccaaggaaaaccagaaaggaaacactcctcttatattagca
gcttcaattgggggattggacatcattaagttacttttaaaggggaatgttgatgttaac
cataagaataacgaagggaaaacagctctacattttgcagcaaggttcaaccatactgat
gtccttcagtatttagtatcaagaggagcaaatccaagagcagaagatggtagcaggatt
attcctatagtgttggctgcccactatggtagcattgaagcactttactacttgctggaa
aatcatggatattgccagtttgaggatcatatgcataagacttgtttacattgggcagtg
gaagctaatagacttgaagtggccaaggttttgatctgccacaaacttagtagttcgtct
gtaggcctgaaagatccacaaggcaacactgccctccatattgcatccacacttgggtat
catcatgttgttcgactacttctgggaaagtttgataaaaaatggaagaaatgtgacaga
gggaaactgccaatccatctggctgcacagaatgggcacacagaggttatcaagatcata
ctggacttcgaccctggccaaatatgttcaagggataaggagggtaatacaccgctgata
aatgctgctttgaatggaaaagaagatgctgcattttgtttggttgaacaacgagccaat
cttgatcaacaggggcctctattccttcaacaacaaaactcaaaatacaaaataactttt
tgtttcagcaacagcaagcagttaacagctttaagttgttgtgcgatgaatgactacacg
aaaacagctttacatttgttgaaggctggtgctagtactgcagttcagaacagcaatggg
gcaacaccactccacattgcatgtatggaaggtagtgcgagtatggtgaagcttctgttg
aaatacgatgcaagtgtaacggcaagagatgggaaaggatacaaccctcttgatcttgct
ataaagtatagacataaggcttgtgcaaaagagataattcagagttcaaaatggaaagca
gcgttaaggaacatgactgtcatcaatgagaaaactggtttgataagcactccactgaga
gaaatgatcaagagcatgccggacactgctgatcttgtgttcaacagatgtactgtggtg
tctactgattatgatcctgaggatgatgaattctgggttgagtttaactttgagttcttg
gatgacatgtacacaagtgcatcatggaagcaattacatgaagcagctggtgaaatgggg
ttgatggtggatactccacattgctttaatgaagatagatcaatggagaaaagctgttct
agttattcagatacaagtcatgtgttaagggacaaccatccacttgccttaattgttaac
cacaacagttcacaacttttacaccaccccttggttctggaccttctcagttacaaatgg
tcaagatacggaagaaacatctactacgcactgctcctggtctactttgtctttctgtct
gcactctctgcatatctactgtcaataccaccaccatatggagtagtgataaaaggaaat
ggttcaaatgtttgctttgaattgaaagatggtgcaaatgcttactggaagagagaggat
tgcacttgttgtcagtatgggtcaagaggggacgtgtttaacacagcattaagttctgtg
gttcttgttgtagcaagtctcagtcttttaaaggaggtttttcaagcttggaaatccaag
ctggcgtacttcctatcttttgataactacatggaagttgcttcttattctttggcaatc
acagctgttctggattggtcagaacaaaccaagttaacaggaataaaagaggattggcag
tggcaacttgcagccatctgcatgttgacatcttggcttactcttgctttgttcttacgg
aagctacctacgcttggaatttatgtgattatgattctcgacattgtgaaaactttcgca
aagttttttgccaccttccttcttttcatcattgcatttgcgtatttcttttacatgctg
cttcaaaatcaggcagagtttaacacatggtggggatctcttatcaaaacaactgtgatg
atgattggtgaaatggacttcagcacaatcttctactcagatcaagatgaatgcagtgcc
agcaactccacaacttgttactcgaagacagctttattctaccctgaactaacctacagt
atatttgctttcttccttgtattgatgcccatcattgtaatgaacctgttggttgggttg
gcagttgatgatattaaaagtgttcagaatcaagctaatgatgcaaagatgggaatgcag
atccagcttgcgctagaggttgagttcatgttaccacaagctctgcagaagcattttgtg
gttggtgttcatagaatttatccaaacaaaatccacaagcaatctactatcaagaagttt
ctgttcaacgacaaagtagtgacggctgttttgacaaacaagtggctgtcacagctacat
gaccaagaagagagcaggattgagatgaaatcaaaagttgccaaacaaagtgaatcagta
aaacgcaagattaagaagctcatgaaacaatgtgaggaactgaacgaaaacatcagaatg
ttggcaagagagagtttacaggagtaa
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