Ciona intestinalis (yellow sea squirt): 113474064
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Entry
113474064 CDS
T01056
Name
(RefSeq) TBC1 domain family member 20-like
KO
K20372
TBC1 domain family member 20
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
113474064
Membrane trafficking [BR:
cin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
113474064
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
TcdA_TcdB
PEN-2
Motif
Other DBs
NCBI-GeneID:
113474064
NCBI-ProteinID:
XP_026693327
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All DBs
Position
14:756054..757866
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AA seq
381 aa
AA seq
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MSRNVTKGKHRSKRTEILKALDQIPVDIVQLRKLAIAPEGLLTSELRAQVWPYLLNTVNQ
EIKAPENIRQHPEFQQVVLDVNRSMKRFPAGISDEEVSELQDQLTDLILSVLTLHPELNY
YQGYHDICVTFLLACGPQLSFQLVERLSTHHLRDFMDPTMSSTTHILNYLIPILDKSDSE
LVKYITKSEVGTTFAISWLITWYSYVLHTQDEIERLYDFFLSCHPLMPIYFAAQIVLQSS
EDIMAGECEMSRVYQILTQSARKPNPPLEELIRKSSDAFILFPPSHLAREAAEFYKNNLA
ISTFCDYALVARHETPDTVLRRLGIYPEDKLPKEKEVVSSSPKKNYWNTARTAVIAVSGA
VGAVVVAASGLDWAPDLFNFL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggaatgtaacgaaaggaaaacaccgatccaagcgaactgaaatattgaaagca
ctcgatcaaattccagtggatatagtgcagctccgcaaactagccattgctccagaaggt
ttactcaccagtgagcttcgtgcccaagtatggccctacttacttaacactgtaaatcag
gagataaaagctccggaaaacatccgacaacacccagagtttcaacaagtcgtcttagat
gtaaatcgttccatgaaaagatttccggccggtatttctgacgaggaggtatctgaatta
caagaccaacttacagatttaattctcagtgttttaactctgcaccctgagctaaactat
taccaaggctaccatgatatttgtgttaccttcctcctagcatgtgggccacagttatca
ttccaacttgtagaacgattatccacacatcacctaagagattttatggatcctaccatg
agcagtacaactcatattcttaattatttaatcccaatacttgataagtctgattcagag
ctggtaaaatacatcactaaatcagaagtaggtacaacttttgcaatcagttggcttatt
acctggtatagttacgttcttcatacccaggatgaaatcgagcgtttgtatgattttttt
ctatcttgtcacccacttatgccaatttactttgctgctcaaattgttttgcaaagttct
gaagacattatggcaggggaatgtgaaatgtcaagggtttatcaaatccttacacaatct
gcccgaaaaccaaatccaccacttgaagagttaatcagaaagtcttcagatgcatttatc
ttatttccaccttcacacttggcaagagaagctgctgaattctacaaaaacaacctagca
atttcaaccttttgcgactatgctttagtagctcggcacgaaacacctgatacagtgcta
cgtaggcttggtatttatccagaggacaaactgcccaaggaaaaggaagttgtttcaagt
tctccgaaaaagaactactggaatactgcacgtacagctgttatcgcagttagtggcgca
gttggtgctgttgttgttgctgcctcgggattagattgggcgccagatttattcaacttt
ctttag
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