Ciona intestinalis (yellow sea squirt): 113474142 Help Entry 113474142         CDS       T01056                                  Name (RefSeq) PMS1 protein homolog 1-like   KO K10864   DNA mismatch repair protein PMS1 Organism cin  Ciona intestinalis (yellow sea squirt) Brite KEGG Orthology (KO) [BR:cin00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cin03400]     113474142 DNA repair and recombination proteins [BR:cin03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     MutL homologs      113474142 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_mis_repair HATPase_c_3 HATPase_c DCX2_DCDC1 Motif Other DBs NCBI-GeneID:  113474142 NCBI-ProteinID:  XP_026689741 LinkDB All DBs Position 3:3969232..3972618 Genome browser AA seq 936 aa AA seqDB search MHKLSSETSKLISSAQVATSVSNVVKELTENALDAGATSIQVKLVDFGLEKIEVRDNGCG IKAEEMKYAAQRHYTSKLRTDKDLLSLLTYGFRGEALSSACEVSDVCITTKTRYDAYSTA YTLDSKGSISLSRPSHLGQGTTVVISNIFKNLPVRKSYYANSKKRKEQLKLTEDMLIAYA LANPSVHLSLSHNKTVIWQKPACKTLSEAVVNVLGSAVSQNLEEKKVQNCEKTVAIHAFV PKKVILRRTCDRCYVLINKRPIQEKQIDKTIKKMLGKGDSEKENNQSGWPTAILSITLPT DTVDVNVNPNKTQVMLTLKEEVLKLVENLLEPNLNLQTDNTTNGSSNSGQNRLVTTTDGK FSSHAGRTTTEVTTTEENLHQTLETCTGSKEMHLHSRSLFEIDGTESQDYRLQSTLNNTN APIFPDFDLISQSCLSTNTDNECTAVPEPVATISDPTVCNSVSNHTLGISCTEGEKEQNI LQQNCNRNDKVPAQNDHVVQKLTPDASMQSRIDVDHSDMSNDHTVNPISKIGNNSDFENE HTAAMESSHHELNISNKKHGENVSASGWSRGRIATDENGSYIQPVRMCTGVKRPSVSLSP SSSLSHETSVKKPRSVFDVLNESAKGLDWENASASMRRDCVSVACAEYDNHKRSATKMNK PSSKERRKFRNSFINLNKKSNNSLGSGNSAMPSTEDDLIDGPTEFSLTFSLMCFLKETQT PGLSQLSKAKVIGIITDLEYRGAVISIGDSLYLTNLHRLQEQCFFTEMMKNHVFTSVPCE PIDITKCNLSPTEFSTLNTLSTCVSMDFGCSQEVTDERICSNGFKVVKLVPNDKTETWQL VGVAKGLLNHTPMQNLKEILNIIHQNPDSQLSSCRCLNAINFFQGEAARVAKSSTPFTKP NKIQDLINLLPKTNGSVIKGKCFHNKPIFIKLSDVR NT seq 2811 nt NT seq  +upstreamnt  +downstreamnt atgcataagttatcttcagaaacatctaaacttatatcaagtgcgcaagtagcaaccagt gtcagtaacgtcgtaaaagaactaactgagaatgcactggacgccggtgcaacgtcgatt caagtcaaattggtcgattttgggcttgaaaaaatcgaagttcgggataatggttgtgga attaaagcagaagaaatgaaatatgcggcgcaaaggcattacacgtcgaagttacgcact gacaaagacttgctatcattattgacatacggttttcggggagaagccctcagctctgca tgtgaagtttctgatgtttgcattacaacaaaaacaaggtacgatgcatatagcactgct tacacactggactcaaagggaagtatatccctttcacgaccttctcatttaggtcaagga acaactgttgtgatttcgaacatttttaaaaatttacctgtccgaaaaagttactatgcc aactctaaaaaacgcaaggagcaactcaaactaacagaggacatgcttattgcatatgca cttgctaatccttcagttcatcttagcctcagtcacaacaaaactgttatctggcagaag ccagcatgcaaaaccttaagtgaggctgtggttaatgttttgggaagtgcagtttcacag aatttggaggagaaaaaagtacagaactgcgaaaaaactgttgctattcatgcatttgtt ccgaaaaaagtcattttaagaagaacatgtgacagatgttatgtgcttattaacaaacga ccaattcaagaaaaacagattgataaaactataaaaaagatgctcggaaaaggggacagt gaaaaagagaataatcaatcaggatggccgacagcaattctttccatcacccttccaact gatacagtggatgtaaatgttaatcccaacaaaacccaagtcatgctaactttgaaggaa gaagttcttaaactagttgagaatctgcttgaacctaatttaaacctacagacggataac actacaaatggcagcagtaactcaggtcaaaatagattagttacaacaacagacggaaaa ttctcatcacatgcaggaagaacaacaacagaagttacaacaacagaagaaaatttgcat caaaccctagaaacctgcactggtagtaaagaaatgcatttacattctcgctcattgttt gagatagatggcacagaatcacaagactacagactccaaagtacgctaaacaacacaaac gcgcccatttttcctgactttgatttgatatctcaatcttgcttgagcacaaatacagac aatgaatgtacagcagtacctgaacctgttgcaacgatttcagaccctacagtatgtaat tcagtaagtaaccatacattaggtattagctgtactgagggtgaaaaagaacaaaatata cttcaacaaaactgtaacagaaatgataaagtacctgctcaaaatgatcatgtcgttcaa aaacttacaccagatgcttcaatgcaaagcagaattgatgtagatcattcagatatgtcc aatgaccatacagtaaaccctatttctaaaattggaaataactcagattttgaaaatgaa catactgctgctatggagtctagtcaccatgaacttaatatttcaaataaaaagcatgga gaaaatgtcagtgcttctggttggagtagagggagaatagctactgatgaaaatgggtca tatattcaacctgtgagaatgtgtactggtgtgaagagaccttctgtgtctctatcccct tcaagtagcttgagccatgagacttcagtaaagaaacctagatccgtgtttgatgttttg aatgagagtgctaaaggtttggactgggagaatgcatcagcaagcatgagaagagactgt gtctccgttgcatgtgcagaatacgataaccacaaacgttcagcaacaaaaatgaacaaa ccatcttcaaaagaaaggagaaaattccgaaactcttttataaacttaaacaaaaagtcc aataactccttgggtagtggaaatagtgcaatgccatcaacagaagatgatttgatagat ggcccaacagaattttcattaacctttagtttaatgtgttttcttaaagaaacacagact cccggattatctcaactatctaaagctaaagtgattggaataattactgatctggaatac agaggtgctgtcattagcattggggatagtttgtacttaacgaacttgcaccggttacaa gaacaatgttttttcactgaaatgatgaaaaatcatgtttttacaagtgtcccttgtgaa ccaattgatataacaaaatgcaatctaagccctactgagttttctaccctaaatacttta tctacttgtgtttctatggattttggttgcagccaagaagttactgacgaaagaatttgc tcaaatggttttaaagtagtgaaacttgtacctaatgacaaaacagaaacatggcaatta gttggagtagctaagggactattaaaccacacaccaatgcaaaatctaaaggaaatttta aacataattcaccaaaatccagactcacaattaagctcatgcagatgtcttaatgcaata aacttttttcaaggagaagccgcaagagtggcaaaatcatctactccttttactaaacca aataaaatccaagaccttattaatttactgcctaaaacaaatggttcagttattaaagga aagtgttttcataacaaacctatttttattaaactgtctgatgttaggtaa

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