KEGG   Ciona intestinalis (yellow sea squirt): 113474468
Entry
113474468         CDS       T01056                                 
Name
(RefSeq) replication protein A 14 kDa subunit-like
  KO
K10740  replication factor A3
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03030  DNA replication
cin03420  Nucleotide excision repair
cin03430  Mismatch repair
cin03440  Homologous recombination
cin03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113474468
   03420 Nucleotide excision repair
    113474468
   03430 Mismatch repair
    113474468
   03440 Homologous recombination
    113474468
   03460 Fanconi anemia pathway
    113474468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cin03032]
    113474468
   03400 DNA repair and recombination proteins [BR:cin03400]
    113474468
DNA replication proteins [BR:cin03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    113474468
DNA repair and recombination proteins [BR:cin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     113474468
   MMR (mismatch excision repair)
     113474468
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     113474468
SSDB
Motif
Pfam: Rep_fac-A_3
Other DBs
NCBI-GeneID: 113474468
NCBI-ProteinID: XP_026691486
LinkDB
Position
8:complement(5569807..5571507)
AA seq 118 aa
MDDVYLEPRPRIVASMMKQNVGKCVTMMGIVAPEKISTDGSSFQMSTESDKEITVLLSSG
LNELLDGIVEVTGTVDQQENLHCVVYRQLNSSESLDIEAYNAAIKMTHKFPNLCSYSQ
NT seq 357 nt   +upstreamnt  +downstreamnt
atggatgacgtgtatttggaacccagacctagaatagttgcttctatgatgaaacaaaat
gtcggaaaatgcgtcacaatgatgggaattgttgctccagaaaagatctctacagatgga
agttcattccaaatgtcaacagaatcggacaaagagattacggttcttttaagttctggg
ttgaatgaactgcttgacggaatagttgaagtcacgggaaccgttgaccaacaggagaat
cttcactgcgtcgtttatcgacaattgaactcaagcgaatcactagatattgaagcctat
aatgctgcaattaagatgacacacaagttcccaaacctgtgttcatattctcaatga

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