Ciona intestinalis (yellow sea squirt): 113474912
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Entry
113474912 CDS
T01056
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
113474912
04121 Ubiquitin system [BR:
cin04121
]
113474912
Transcription factors [BR:
cin03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
113474912
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
113474912
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZBED1_RNase-like
ZBED1_RNase-like_helical
Dimer_Tnp_hAT
zf-BED
FAM200-ZBED5_RNase-like
DUF8247
DBD_Tnp_Hermes
WASH_WAHD
hAT-like_RNase-H
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
113474912
NCBI-ProteinID:
XP_026693690
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
EEEEKKRQKERRLNEVNKRRSLEGLQKDALQRQKEFEQKWFSKSESDVSCKLCSKGFSLR
CSTTTLKYHLQSSHKDKLAGASGPSSSGSSESDVLVQSDIRQYQVRPKLSDDESRRIDVL
VSSFMWRDMRPFHIVEGQGFRDLVHGLNHQYKIKHRSTYQAITERTYKSAKSFLLDVLQH
ANYMGITTDMWTSIRNDSYITVTVHWITDDWKMQHGVLTTECMTEANTAENLSLRLTDVL
AEYRITSNKISATVTDNGRNIKKAVDLLDDWTQLSCFAHTLQLCVKAGLDIPAVSRMRAG
ARRLVNHFKHSSKATAALREKQFSLRPGETVLDLITECPARWNSTFDMFDRLLLLQWCIR
AVLTDFKITKPSVASSLQMSSTQWDLCQSLVHVLKPLKIATTMMSASKYPSIPWIYPVLF
TLQKKLESCDIDSGATAHCKTAIREQIDKRFFASNWHRNLPVLASVLDPRYKFLKFIDND
ATRQEVYDHLKGQITEFAAKYSDFEQHLQSESTNEAHTFDPFEELCGKDTKKQTVVAPED
EIKAYLREPAQPSDSDPLQWWKLNAARLPTMSLMARFYFCSWLRKRKNSSPEVLTIEIDN
AIAVRGVLDQSHSVAYREATINERGRAFRP
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
gaggaagaagagaaaaaacgacaaaaagaaagaaggttaaacgaggtgaataaacgtcgt
agtttggaaggtttacaaaaagatgcacttcagcgtcaaaaagaatttgaacaaaagtgg
tttagcaagagcgaatcagatgtttcgtgtaagttgtgcagcaaaggatttagtttacgt
tgttctaccacaacattaaagtatcacctacaatctagccataaggacaagttagcaggt
gcaagtggaccctctagttctggatcgtccgaatctgatgttttagttcagtcagatatt
cgtcagtatcaagtgcgaccaaaactatcagacgatgaatcgcggcgtattgatgtgttg
gtgtcgtcatttatgtggagagacatgcgtccatttcatattgtggaagggcaaggattt
agagatcttgttcatggcctcaatcatcaatataaaataaaacacagatcgacatatcag
gcaatcactgaacgtacatacaagagtgctaaatcttttttactagacgttttgcagcat
gccaactatatgggaataacaacggatatgtggacttcaattcgcaacgacagttacatc
acagtaaccgttcattggattactgatgattggaaaatgcaacacggcgttcttactaca
gagtgcatgacggaggcaaataccgctgaaaacctttctctaaggttaaccgatgtattg
gcggaatatagaattacatctaacaaaataagcgcaactgtaactgacaatggcagaaat
ataaaaaaggctgtagatctattggatgactggacccaattgtcgtgttttgcacacacc
ctacaactttgcgttaaagcgggtctcgatattcctgcagtatcaagaatgcgagctgga
gcacggcgacttgttaaccactttaaacattcatcaaaagcaactgcagcactacgtgaa
aagcagttctcactgcgaccaggcgaaactgttctggacttaattacagagtgtccagct
cgttggaacagcacattcgacatgttcgaccgcctgcttttgcttcaatggtgcattaga
gctgtattaaccgacttcaaaataacaaaaccctcagttgcttcatctctacaaatgtca
agcacacaatgggacctctgccaatcacttgttcatgttttgaaaccattaaaaatagca
acaacaatgatgtcagcaagcaaatacccgtccattccctggatttacccagtgttattc
acgctgcagaagaaactggagtcttgcgatattgacagtggtgcaaccgctcattgcaaa
acagctatacgagaacaaattgataaacgtttttttgcatctaactggcataggaatttg
cctgttttagcatcagtattggatccgcgatataagtttctcaaatttatagacaatgat
gccacaaggcaagaagtgtacgaccatcttaaaggacaaatcacagagtttgcggctaaa
tattctgatttcgaacaacatcttcaaagtgaaagtacaaacgaagcgcatacatttgac
ccctttgaggaattgtgtgggaaagatacgaagaagcaaacagtggtcgcaccagaagac
gaaattaaggcatatttacgcgaacctgcgcagccatcagactctgatccgctacagtgg
tggaagcttaacgcagcgcgtctacctacaatgtcgcttatggcccgtttctacttctgt
tcgtggttgcgcaagagaaaaaatagttcacctgaggtattaacaatcgagattgataac
gcaatcgctgttagaggagtgctcgatcaaagccacagcgtcgcttatcgcgaagctaca
atcaacgaacgcggacgcgcgtttcgtccctag
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