Ciona intestinalis (yellow sea squirt): 445591
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Entry
445591 CDS
T01056
Symbol
dead1a
Name
(RefSeq) DEAD-Box Protein
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
445591 (dead1a)
Enzymes [BR:
cin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
445591 (dead1a)
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Gene silencing
piRNA pathway
445591 (dead1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
zf-CCHC_3
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
445591
NCBI-ProteinID:
NP_001027593
Ensembl:
ENSCING00000001412
UniProt:
O96069
LinkDB
All DBs
AA seq
659 aa
AA seq
DB search
MFDDDWEPAPLTALGNTDFRGASSFDNPYSKKDDGGFGSGFGDSRGGARSKGCFKCGEEG
HMSRECPQNTGSGFGDSRGGARSKGCFKCGEEGHMSRECPQNTGSGFGDSRGGARSKGCF
KCGEEGHMSRECPQNTGSGGDHAAQEYHKAGDGDKPRPPLYIPPPPPEDEVEMFASMQRG
INFGKYDAIPVEVSGLNAPKCISTFEMANLQETILVNVQKAGYDRPTPVQKYSIPIINAD
RDLMACAQTGSGKTAAFLLPVLTKLVESGVKSSEFSEKKTPQAIIIGPTRELVNQIFLEA
RKFSRSTIIHPVVVYGGTSVGYQIRAVQKGCDVLIATPGRLMDFINRGLIGLENVRFIIL
DEADRMLDMGFESEIRKLVSLPGMPQKNNRHTLMFSATFPDEIQKLAHDFLREDFLFLTV
GRVGGACSDVTQTVISVEWKDKRSKLLELIADVNETKSRTLVFVETKRGADFLACVLCQE
DFPTTSIHGDRLQQDREQALRDFKLAVCPILVATSVAARGLDIPKVEHVINYDMPREIDE
YVHRIGRTGRCGNLGRATTFFDNKKDANLARSLVKILSEAQQEVPGWLGECAESAVGSNF
GAEKGRFGGKDLRERGGEGITGFGSMGGGSGARSTADYDYNDGGGFDCVGVNDDDDSWD
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgacgattgggaaccagcacctttaaccgcccttggaaacacagattttcga
ggtgcaagttcttttgataacccgtattccaagaaagatgatggtggttttggttcaggt
tttggtgatagccgtggaggtgcacgcagcaaaggttgttttaaatgtggagaagaaggt
catatgtccagagaatgcccgcagaacactggatcaggttttggtgatagccgtggaggt
gcacgcagcaaaggttgttttaaatgtggagaagaaggtcatatgtccagagaatgcccg
cagaacactggatcaggttttggtgatagccgtggaggtgcacgcagcaaaggttgtttt
aaatgtggagaagaaggtcatatgtccagagaatgcccgcagaacactggatcaggtgga
gatcacgctgctcaggaatatcataaggctggagacggagataaacctcgtcctcctctg
tacattccccccccacctcctgaggatgaggttgaaatgtttgctagcatgcagcgagga
attaactttgggaagtacgatgccatccctgtggaggtgagcggactcaacgctccgaag
tgcatttcaactttcgagatggcaaacctccaagaaacaatcctggtaaatgtgcagaaa
gcaggttatgacagacctacacctgtgcaaaaatacagcattcccattattaatgctgat
cgtgacttgatggcatgtgcacagacaggatctggcaaaacggctgcgtttttgcttccg
gtccttactaagctggttgaatcgggtgtaaagtcgtctgaattcagtgaaaagaaaact
ccacaagcgattataattggcccaacaagagaacttgtaaaccagatttttctggaagcc
cgtaaattctcacgtagcaccattattcatccagtggttgtatatgggggcaccagtgtt
ggttaccaaataagagctgtacaaaaaggttgtgacgtattgatcgcaacccctggtcgt
ctgatggattttattaaccgtggcttgattggtctggagaatgttcggttcattatcctc
gatgaagcagatcggatgttggatatggggttcgaatctgagatcaggaagcttgtatct
ttaccagggatgccacagaagaacaatcgtcacacgcttatgttcagcgcgacatttcca
gatgaaatacaaaaacttgctcacgactttctccgggaggacttcctgttcctcacagta
ggaagagtagggggagcatgctccgatgtcacgcaaacagtgatctccgtggagtggaaa
gacaaacgctccaaactactcgagcttattgcagatgttaatgaaaccaagagtcgtact
cttgttttcgtagaaaccaagagaggagctgatttcctcgcttgtgttttatgccaagaa
gatttcccaaccacaagcatccatggagatcgtttacaacaagatagagagcaagcactc
cgtgatttcaaattagcagtttgtccaatacttgttgctacttcagttgctgcaagagga
ttagacataccaaaggtagagcatgtgattaactatgacatgccgagagaaatagatgaa
tatgtgcatcgaatcggacgtactggtcgttgtggtaacctgggacgcgcaactacattt
tttgacaacaaaaaagacgcaaatctggctcgctcacttgttaaaattctttccgaggct
caacaagaagttccaggttggttgggggaatgtgcagagtctgctgttggttcgaatttc
ggagcagaaaaaggaagatttggtggaaaagaccttcgggagagaggtggagaaggaatt
actggtttcggatcaatgggtggtggaagtggagcaaggagcactgctgattatgattat
aatgatggtggtggtttcgactgtgttggtgtgaatgacgatgatgactcgtgggattaa
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