Ciona intestinalis (yellow sea squirt): 445641
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Entry
445641 CDS
T01056
Symbol
pdedelta
Name
(RefSeq) cGMP phosphodiesterase delta subunit
KO
K13758
retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00230
Purine metabolism
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
445641 (pdedelta)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
445641 (pdedelta)
Membrane trafficking [BR:
cin04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
445641 (pdedelta)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMP_PDE_delta
Motif
Other DBs
NCBI-GeneID:
445641
NCBI-ProteinID:
NP_001027639
Ensembl:
ENSCING00000003961
UniProt:
Q8SSZ0
LinkDB
All DBs
Position
12:complement(3363194..3368542)
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AA seq
153 aa
AA seq
DB search
MASEANHPEQVDKILDGFKLNWMNLRDASSGKVLWQGDSDLSKPGFEHEARVPKKILKCK
AVSREINFSSLEVMEKFRLEQRVLFKGKCLEEWFFEFGFVIPDSTNTWQSVIEAAPASQM
MPASVLSGNVVIETQFYDDDVLVSTSRVRIYYV
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgaggcaaaccaccctgaacaagttgacaaaatattggatggctttaagctg
aattggatgaatctaagagatgcctcatctggtaaagttttatggcaaggtgattctgat
ttatcaaagccaggattcgaacatgaagctcgtgtgcctaagaaaattctcaaatgcaaa
gcagtttcacgtgaaatcaacttttcctcgttagaggtcatggaaaagtttcgacttgaa
caaagagttctatttaaaggcaaatgtcttgaagaatggtttttcgaatttggtttcgtg
atacctgattctaccaatacatggcaatctgttattgaagcagctcctgctagccaaatg
atgccagcaagtgtgcttagtggaaatgtggtgattgagacacaattttacgatgatgac
gttttagtgagcacttcacgtgttcgaatttattatgtttga
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