Ciona intestinalis (yellow sea squirt): 445669
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Entry
445669 CDS
T01056
Symbol
otx2
Name
(RefSeq) Otx
KO
K09326
homeobox protein OTX1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
445669 (otx2)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
445669 (otx2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
CPSF73-100_C
Macoilin
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
445669
NCBI-ProteinID:
NP_001027662
Ensembl:
ENSCING00000019349
UniProt:
Q4H303
H2XP70
LinkDB
All DBs
Position
4
Genome browser
AA seq
425 aa
AA seq
DB search
MSYLKSPHYAMNGLGLGHDMNLLHPTVTYPGDSAACYFQRIQGMHQGAKNMQFAAPPVYS
SSRKQRRERTTFTRAQLDILEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKC
RQQVQQQQQKQKSGSGGSSSNSSSSTGSSSSGSASSTNSNNNSSSSSNKKKSPPTTPTPT
ANGPTTSSSPFQQHGAPSAHAPHAQSTSPPLPSSPVSSNGQIAPSVTPSELMSANGPAPI
SLPGSHGAHSGMVHNGSSSNIWSPASVSPGASSDGASNVPGIGYTGALGSNNSPYMAAAA
AVAHAAHSPYSATSNAQVSSTGYPQNYHTSHSYFGTMEASYLPSVPFPGAAPGCGMGDMS
MAGQQSAAQLGHHGTGQPHPASHHQFMSQSYPYHHASSGVTPTYPTVSDCLDYKDQTQAW
KFQVL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatttgaaatctccccactacgctatgaatggactgggcttaggccacgatatg
aatcttcttcaccctacagtcacctatcccggcgactctgcagcttgttacttccaacga
atccaaggaatgcaccaaggagctaagaacatgcaatttgcggcaccaccagtatacagt
tcgtctagaaaacaaaggcgagagcgaacgaccttcacacgagctcaactcgatattttg
gaagctttattcggaaagacaagatatcccgatatctttatgagagaagaagttgcccta
aagatcaaccttccagagtcccgagtacaggtgtggttcaaaaatcgacgagcaaagtgt
cgccaacaagtgcaacaacaacagcaaaaacaaaaatccggctcaggtggcagttcatct
aattcaagcagtagtactggtagcagcagcagcggaagcgccagcagcaccaacagcaac
aataatagctcatcaagttcaaataagaagaaaagcccaccgaccacacctaccccaacg
gcgaacggacctactaccagcagttcacccttccagcaacacggagcaccttcagcacat
gccccacacgcccaatcaaccagtccacctttgcccagctctccagtgtcatctaacgga
caaatcgcaccatctgtcacgccatcagagcttatgagtgccaacggcccagcaccgatc
agtttacctggatcccatggcgcacacagcggtatggtacacaacggtagttcaagcaac
atttggagccctgcttcggtctctcctggtgcaagcagcgacggagcatcaaacgtccca
ggtatcggttacaccggtgctttgggaagtaataactccccatacatggctgccgcagct
gctgtagctcacgctgcacattcaccatactctgcgacatccaatgcacaagtttcatca
actggctacccacaaaactaccacacctcgcactcttacttcggtacaatggaagcgtcc
tatcttccatctgtacctttcccgggcgctgcacctggatgcggaatgggagatatgtca
atggcagggcagcagtccgcagctcagcttggccaccacggtactggccaaccccaccca
gcaagccaccatcagtttatgtctcagtcgtacccctaccaccatgcatcgtcaggggta
acgccgacctaccctactgtctcggactgcttagactacaaagaccaaacccaggcgtgg
aaattccaagtcttgtaa
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