Ciona intestinalis (yellow sea squirt): 445676
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Entry
445676 CDS
T01056
Symbol
titf1
Name
(RefSeq) homeobox transcription factor TTF1
KO
K09342
homeobox protein Nkx-2.1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
445676 (titf1)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
445676 (titf1)
SSDB
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
445676
NCBI-ProteinID:
NP_001027667
Ensembl:
ENSCING00000006231
UniProt:
O96738
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All DBs
Position
10
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AA seq
477 aa
AA seq
DB search
MSVSPKHSTTTPFSVTDILSPLEESYGTGSVEGIVSGRREFSELYSNMESGAASSAGIHV
PNLGGGGSTGSISSPMTSYRQPMMGTPPHHSIHHQQMSSANPYQTAAGMNGSYNLHPMPT
PPQTSFHAMPGSGGPTPYGNGGVPELPPYNNVQSPWYGAPSNPDPRFVPSYPRLQITGYG
SMMPGTGMDGMHKTLLPPSQRRKRRVLFSQAQVFELERRFKQQKYLSAPEREHLAQMIHL
TPTQVKIWFQNHRYKNKRSLKDKQTQEMSVQQQQQQQQQSQTSGNAQPQHTNDLSHSNPS
QLQPVASAVPGGTRTPQETYSPVPTGVQASQPGMVDGNDGHRMVHISNQNGDQSSPRHLT
MSDGSCHDSTIIESPNMQMPMPNVVQPTDTEAGLGPFSSVIKLEEVNADSAEGSGGNSGN
IVPQTHYLGSTHHHDLMNVNVTTLNAVDAYQHHPHHNHIPIGNTVLNDQSILYSVYR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttagcccaaagcattcgactacaaccccattttcagttaccgatattttgagt
ccgctagaagagtcgtacgggaccggttcggttgaaggcattgtcagcggccgcagggaa
tttagcgagctgtacagcaacatggaatccggcgcggcctcgtcggcgggaattcacgtc
ccgaatctcggcgggggaggcagcacggggtcgatctcttcccccatgacttcgtaccga
caaccgatgatgggcacgccgccgcaccattctatacaccatcagcaaatgtcatctgcc
aacccttaccagactgcagcaggaatgaatggaagttataacctgcaccctatgcctacc
ccaccgcaaacctcgtttcatgcaatgcctggatctggtggaccgactccctatggcaac
gggggtgttccggagctgccaccgtataataatgtacaatctccatggtacggtgcacct
tcaaatccagacccaagatttgtcccaagttaccctcgtttgcaaattactggttatggt
tctatgatgccaggtacaggcatggatggaatgcacaagacgcttctgccaccatctcag
agaagaaaacgaagggttctgttttcccaagcacaggtgtttgaactagagagacgtttc
aagcaacagaaatatctctccgctcctgaaagggaacacctggcacaaatgatacatctt
acgccaacgcaggttaaaatttggtttcaaaatcaccggtacaaaaacaaacgttcacta
aaagacaagcaaacgcaagaaatgagtgtacaacaacaacaacaacagcaacagcagtcc
cagacctctggtaacgcgcaacctcagcacacaaacgatctgtctcactcgaatcctagc
cagctccagcccgtagccagtgctgtaccgggcggaacacggacgccacaagaaacgtat
tcccctgttccaactggtgtccaggcttctcagccaggtatggtggatggaaacgatggg
cataggatggttcacatttcgaaccagaacggtgaccagtcttcgccgcgccatttaacc
atgtcagatggttcttgccacgattcgacgatcatcgagtcgccaaacatgcaaatgccg
atgccgaacgtcgtgcaaccgaccgacaccgaagcaggccttgggccgttttcaagcgtc
ataaaactcgaagaagtaaacgctgactcggcggaagggtccggcgggaactcgggcaac
atcgtcccgcagacgcactaccttggctcgacccaccaccacgacctaatgaacgtgaac
gtgacgacacttaatgcggtcgacgcgtaccaacaccacccccaccataaccacatccct
atcggcaacactgtcttgaacgatcagtcgatcctgtacagtgtttaccgatga
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