Ciona intestinalis (yellow sea squirt): 445677
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Entry
445677 CDS
T01056
Symbol
msxb
Name
(RefSeq) msxb homeoprotein
KO
K09341
homeobox protein MSX
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
445677 (msxb)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
445677 (msxb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
445677
NCBI-ProteinID:
NP_001027668
Ensembl:
ENSCING00000009129
UniProt:
Q9XZR1
F6S3B3
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All DBs
Position
2:5773526..5775829
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AA seq
327 aa
AA seq
DB search
MTVNESDRIQSSVLSECVSEPEVTSSTVTSPKPKEESINHDKDSSFNNSETQENPPKKIK
KEKLNFSIEFLLSKPERKTRTPPIQSTDASLQHKPYFSGYFTSYNPTFDPFSMWGKSHSP
PKPQLDYPAITSKESSPTRSDVTETDDCSYESTSPKSNDVIPTSPNAFRMSKCSLRKHKP
NRKPRTPFSTEQLLSLERRFQDKQYLSIAERAEFSASLALSETQVKIWFQNRRAKAKRLH
EAEFEKVKLAAAAAAYTDLLQPPTKPHALYPGYGVRGIPTDPAMRLGHTGPLARGVTASP
SLNAFSNFAQSRCHRPATISYYPTESR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaaacgaatccgatcgtattcaatcctctgtattgtcggaatgtgtatccgaa
cctgaagtgacgtcatcgacagtgacgtcaccaaaacctaaggaagagtcaattaaccac
gacaaagattcgagttttaataattcagaaacacaagaaaatccaccgaaaaaaattaaa
aaggaaaaacttaattttagcattgaattcctactttccaaacctgaaaggaaaacccgg
acacctccaatccaatccacagatgcttcccttcaacacaaaccttatttttccggatat
ttcacaagttacaacccaacttttgaccctttttctatgtggggtaaatcccattcaccc
cccaagccccaactcgattacccagctataacgtcaaaggaatcgtcacccaccaggtct
gacgtcacagaaactgatgattgtagttacgagtcgacgtcgccgaagtctaatgacgtc
attccgacgtcaccgaatgctttccgtatgtctaaatgttcacttcgtaaacacaaacca
aaccgaaagccccgcacaccgttcagcaccgagcaactactttcattggaacgaagattt
caggacaaacaatatctttctatagcagaacgtgcagaattttctgcctctcttgcgtta
tctgaaactcaggtgaaaatttggtttcaaaaccgtcgcgctaaagcaaaacgtcttcac
gaagctgagtttgaaaaagtgaagctggctgctgcagcagcagcatatactgacttatta
caaccgcccacaaaacctcacgccttataccccggttacggtgtaagaggaatacccaca
gacccagcaatgcgattggggcatactgggccactagcccgaggtgtaacagcatcgccg
agcctaaacgcattttcaaactttgcccagagccgttgtcatcgaccagcgactatctcc
tactacccaactgagagtcgttag
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