KEGG   Ciona intestinalis (yellow sea squirt): 445702
Entry
445702            CDS       T01056                                 
Name
(RefSeq) Rac1 protein
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04145  Phagosome
cin04148  Efferocytosis
cin04310  Wnt signaling pathway
cin04620  Toll-like receptor signaling pathway
cin05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cin00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    445702
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    445702
   04148 Efferocytosis
    445702
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    445702
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    445702
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    445702
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cin04147]
    445702
   04031 GTP-binding proteins [BR:cin04031]
    445702
Membrane trafficking [BR:cin04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    445702
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    445702
  Macropinocytosis
   Ras GTPases
    445702
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    445702
Exosome [BR:cin04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   445702
  Exosomal proteins of other body fluids (saliva and urine)
   445702
  Exosomal proteins of colorectal cancer cells
   445702
  Exosomal proteins of bladder cancer cells
   445702
GTP-binding proteins [BR:cin04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    445702
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU
Other DBs
NCBI-GeneID: 445702
NCBI-ProteinID: NP_001027692
Ensembl: ENSCING00000002350
UniProt: Q7YT79
LinkDB
Position
9:4139017..4154930
AA seq 192 aa
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVAHHCPDTPVILVGTKLDLR
DDQETIQKLKEKKLAPILYPQGLQMAKEVNAVKYLECSALTQKGLKTVFDEAIRAVLCPE
QKPKKKKPCELL
NT seq 579 nt   +upstreamnt  +downstreamnt
atgcaggcgatcaagtgtgttgtggttggagatggagctgttggtaaaacctgtttgctg
atcagctacacaaccaatgctttccctggagaatatattcccactgtgtttgataactac
tctgccaatgtcatggtagatggccgccctgtcaacttgggattatgggatacagcaggg
caggaggattacgacagacttcggcctctctcctacccacaaacggacgtttttctgatc
tgtttctcactcgtgtcaccagcctcattcgaaaacgtgcgcgcaaagtggtatccagaa
gtcgcacaccactgtccagatacaccggtcattctcgtgggaacaaaacttgatttacgt
gacgaccaggaaaccatccaaaagctgaaagaaaagaaacttgccccaatcctctaccca
caagggttgcagatggcgaaagaagtgaacgccgtaaagtacctggagtgctcggctctc
acccaaaaaggcctgaaaaccgttttcgacgaggcgatccgcgccgtcctgtgccctgag
caaaagccgaagaaaaagaagccctgcgagcttttgtga

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