Ciona intestinalis (yellow sea squirt): 619275
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Entry
619275 CDS
T01056
Symbol
xt
Name
(RefSeq) xylosyltransferase
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cin00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cin01100
Metabolic pathways
Module
cin_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
619275 (xt)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
619275 (xt)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
619275 (xt)
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
619275 (xt)
Glycosyltransferases [BR:
cin01003
]
O-Glycan biosynthesis
Glycosaminoglycan
619275 (xt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Branch
Xylo_C
Motif
Other DBs
NCBI-GeneID:
619275
NCBI-ProteinID:
NP_001029012
Ensembl:
ENSCING00000004363
UniProt:
Q5QQ55
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All DBs
Position
3:complement(4233292..4245935)
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AA seq
848 aa
AA seq
DB search
MSLHRTLRRFLRKWKALVYAVSFILLIQAFFTFQSSPNLMEEEHLRRLKELQIKKHQELA
NSMLQGERALVHGRDKLVLNPRDPGFREEFFKHSNNEINILEDHNIGQVDKMEKPVLKPN
ENKFEEIHFATEKVPEIIVKYQPKCDITIKDSISALSRATTDRCKQQIADAACKMQDGTL
FPKSMPRTCKHESKFTFDAPMPTSFDPDIRPVRICYMLVVHGRAIRQLRRLLKVIYHRDH
YYYIHVDKRSDYLLREVLKETEQYPNIKVAPWRMATIWGGSSLLQTLLRAISDVLRIWKD
WDFFINLSALDFPIEKDEKLVQYLSKYRDKNFMKSHGREDEKFIRKQGLNRVFVECDQHM
WRLGERQLPEGITVNGGSDWVALNRRLCDFAVNGNDQLLTQLKHWYEYTLLPAESFFHTL
VQNSDLCETFVDNNIRVTNWNRARGCKCQYKHIVDWCGCSPNDFYPSDLVRLRTSRPVFF
ARKFEESINQEVVNHLDFKLYGDYPPGTPALHSLWENALRVNSKMPSDCNLSVVSMLQVE
MHKKDEEFVGYVVTFDAGWVGRRGAGDDPATSEDGSRVQLQAFLSPQPSLRILDRSSNLA
KRLETASVGTNWDVKELVIRDWGGLVGPNSDVHLVARWSRSEDDFVVTVVVIDPLNVVAD
YNDFRTPSKAAGVTETPLSLKKPLRPGRWLVRFYVQRQFTNICAELDFYVTPQEFKGGIE
GDSVLREINRGVVDDAQVNAANRNLYSIRTTLNLARNNQAETELASESNHVAGLKLRNWV
DFVVSSGWKAKDACLVAQSPETWREAQPRRCFMPRQGTPNLCENTNWSSLSPDPKTELIS
VKPDGRIR
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcatcgaacactaagacggtttctccggaaatggaaagcactggtttacgcc
gtatcgtttatactcttaattcaggcattttttacgtttcaatcaagtccaaacctcatg
gaagaagaacatttacgaagattaaaagaacttcagattaaaaaacatcaagagcttgcc
aactcaatgctgcagggtgagcgtgcattggtacatggaagagacaagttagttcttaat
ccccgggatccgggatttcgtgaagagttctttaaacattcaaacaatgaaatcaacatt
ttggaggaccataacattggccaagtggataaaatggaaaaaccagtgttgaaacctaat
gaaaataaatttgaagaaattcattttgcaacagagaaagtaccagagataatagtcaag
taccaaccaaagtgtgacatcacaattaaagattctatatcagcgttgtctcgagcaaca
actgatcgatgtaaacaacaaattgcggacgctgcttgcaaaatgcaagatggtacattg
tttccaaaatctatgccaagaacgtgcaaacatgagtcaaaatttacatttgacgcccca
atgccgacctcatttgaccctgacattcggcctgttcggatttgttacatgttggttgtg
catggtcgagctatacgtcagttacgtcgcttgttgaaagttatttaccatcgtgatcat
tattattacatccacgtggataaaagatcggactacctgttaagagaggtattgaaggaa
actgagcaatatcccaacatcaaagttgctccctggaggatggcaactatatggggagga
tcaagtctacttcagactctcctccgagccatcagtgatgtcctccggatttggaaagat
tgggatttctttatcaatttgagcgctctggacttcccaatcgaaaaagatgaaaaactg
gttcaatacttgagcaaatatcgtgataagaacttcatgaaatctcacgggagggaagat
gagaagtttatcaggaaacagggattaaacagagtgtttgttgaatgtgatcaacacatg
tggaggttaggggaaagacaattgcctgaaggaatcacagtgaatggaggaagtgattgg
gttgcattgaaccgacgattgtgtgactttgctgttaatgggaacgatcaattgctcaca
caacttaagcactggtatgagtatacattgttacctgcagaatcatttttccatactttg
gttcaaaacagtgatttgtgcgaaacatttgtggataataatatccgtgtgacaaactgg
aaccgtgcgcgtggttgcaagtgccaatataagcacatagtggattggtgtggttgctcc
cccaatgatttctatccatctgatcttgtgagacttcgaacttcgcgtccagttttcttt
gcaagaaagtttgaagaaagcattaaccaagaagtggtgaaccatcttgattttaaacta
tatggtgattacccaccaggcacccctgctttacattcgctatgggagaacgcgttacgt
gtgaattcgaaaatgccgtcagattgtaatttgagcgtcgttagcatgctgcaggtggaa
atgcataagaaagatgaagaatttgttggttatgtggtgaccttcgacgcagggtgggta
ggtaggaggggtgcgggtgacgaccctgcaacatccgaggatgggtcaagggttcaactg
caggcatttttatcacctcaaccttctctacgtattcttgaccgatcgtctaatcttgcc
aagcgactcgaaacagcttcggttggaacaaattgggatgttaaggagcttgttataaga
gattggggtgggcttgttgggcccaacagtgatgtccatttggtggctcgctggagccgt
tcggaggacgattttgttgtcactgttgtcgtgattgacccactgaatgttgtggccgat
tataacgatttcaggacgccgtcaaaagcagcgggggtgacagagacaccgttaagttta
aaaaaacctcttcgacctgggcgttggttggtgaggttttacgttcagcggcaattcacg
aatatatgcgctgagttggatttttacgtcacgccgcaggagtttaaaggggggatagaa
ggagattcagtgttgcgtgaaattaacagaggtgtggtagatgacgctcaggttaatgct
gccaacaggaatctttattctattcggacaaccttaaacttggctcggaataatcaagct
gaaactgaacttgcgtcagaatcgaatcatgtcgctggtttgaagttacgaaactgggtc
gattttgtggtttctagtgggtggaaagccaaggacgcatgtcttgtggcgcagtcacca
gaaacgtggcgtgaggcgcagccacgccgttgtttcatgccgcgccaggggacacctaat
ttgtgtgaaaatacgaattggtcctcgctgtcccctgaccctaaaactgagttaatttcc
gtgaaaccagacggccgaattaggtga
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