Ciona intestinalis (yellow sea squirt): 723804
Help
Entry
723804 CDS
T01056
Symbol
ci-arfgap-11
Name
(RefSeq) zinc finger protein Ci-ArfGAP-11
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
723804 (ci-arfgap-11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
723804 (ci-arfgap-11)
Membrane trafficking [BR:
cin04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
723804 (ci-arfgap-11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
Ank
SH3_1
SH3_9
PH
Ank_4
SH3_2
BAR
Ank_3
Ank_5
IMD
PH_13
PH_3
Motif
Other DBs
NCBI-GeneID:
723804
NCBI-ProteinID:
NP_001041455
Ensembl:
ENSCING00000006711
UniProt:
Q1RL50
A0ACM8Q9Z9
LinkDB
All DBs
Position
2
Genome browser
AA seq
990 aa
AA seq
DB search
MSDRISVIEFLAETKDDVNSPTTSTFTSKMSLCRATIAALEEASPIFLSAXKKMKNSTKA
MYNSGLAQVSNEANFIENLEKLGAGALYNAKEPEPDIGSAFLKLAVFTKELSSLFKNLVS
NISNIIMFPLESLLKGDLKGIKGDMKRPFDKSWKDYDTKVKQVEREKRQLAKDAGMIRNE
ITGAEIAEEMEKERRMFQLQMCDYLIKANEIKTKKGVDLLQHLVEFYHAQNTFFTDGYKV
IEHFRAYAEDLTSNLHSLRQAQDEERRQLVELKTILKTSVSDPDNAPGGKSQANVYNLHQ
LQGNKELGTEKAGYLMKRSEGLRKAWQKRKCIVAGGFLTISHNNMNKAPVKLNLLTSQLK
LVSEDKKQFDLVAHNRTYRFMAEDDNDAVAWVSVITNSKEDALNRVFGDAAAGKDGNEQN
PGLRELTQSVIDEVRRLPGNDRCCDCNAPEPTWLSTNLGVLLCIECSGIHRDMGVHVSRI
QSITLDDLGTSELLLARSVGNDNFNDIMEDKLESEMKPTPSSNMEERKSFIRGKYISRKY
VVHTCADDPDALTDELGQAIRSCDVFSLLQLWAEGADMCAPLPGYDDAETALHVAVSMPN
HDCSGTVLPLVDFLAQNIGSGMNKKTISGNTALHICAEMNQTECMKLLLRSKASPDIENA
RGETALQITRRMDHPGCEEILEQAASGKFRSIVHINIDWNLTFNDEDDFISDDDLDDKAL
LSLPQQFIGMSPAKTNNNSGDSHRHRPTSFKERTRPLPDVPPPPPRGPPPAVPQHASAAV
PRARSHTAAPGSIDPRKSGIEGRPPAPAIPNKPDLPLKSTPRSSSLVTANIYPLQVPTND
IRRESTPEIPLKSVTSLRNTRFASFGGKRRKSKQISGLKPGQPGSIEKSRSLPRNSSPSD
LRPDPNRSDAPVPLPRSSQIPPPTPRPKRVRAIYDCEADNQDELTFVENEIIVVTGVEDQ
DWWVGHVEHQPHRVGVFPVSFVHILSDGAP
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagaatctctgttatagagttccttgcagaaacaaaagatgatgttaattca
ccaaccacctcaacttttacgtcaaagatgtcactatgtcgtgctactatagcagcattg
gaagaggcaagtcctattttcttatctgcantaaagaaaatgaagaacagcaccaaagct
atgtataactctggacttgcgcaagtaagcaatgaggcaaacttcattgaaaaccttgag
aaactaggagctggtgcgttgtacaatgcaaaggaaccggaacctgacattggatcagca
tttctaaaacttgcagtgttcactaaagaattgagttccttgttcaaaaatctggtatcc
aacattagtaacatcattatgtttccattggaatcgcttctcaagggtgacttgaaaggc
ataaagggggatatgaaacgaccctttgataaatcttggaaggattacgacacaaaagtg
aaacaagtggaaagagagaagagacagcttgctaaagatgcggggatgattcgtaacgaa
ataacgggggcggagattgcggaggaaatggaaaaggaaaggagaatgtttcagctgcaa
atgtgtgattacctgatcaaagcaaatgaaataaaaacaaagaaaggagttgacctgctg
cagcatttggttgagttttaccacgcacaaaacacctttttcaccgatggatacaaagtg
attgagcatttccgtgcctatgcagaagatttgacctcaaatttgcattcactgcgtcaa
gctcaggatgaagaaagaaggcagttggttgaattaaaaacaattttaaaaacttctgtg
agtgatcctgataatgcacccggtggaaaaagtcaagcaaatgtttacaacttacatcaa
ctgcagggcaacaaagagcttggcacagagaaggctggatatttaatgaaaaggagtgag
ggcttgagaaaagcttggcagaaacgaaagtgtattgtagctggtggatttctaactata
tcgcataataatatgaacaaagctccagtgaaattaaatttattgacaagtcaactcaag
ttggtgtcagaggacaagaaacaatttgacttagtggctcacaaccgcacgtacaggttc
atggcagaagatgataatgatgctgttgcgtgggtatcagtgattacaaacagcaaggaa
gatgcattgaaccgagtatttggtgatgctgctgcgggaaaagatggaaacgaacaaaac
cctggcttacgtgaactcacacagtcagttattgatgaagttaggagactacccggtaat
gacagatgctgtgactgcaatgcaccagaaccaacatggctatctacaaaccttggagtt
ttactttgcattgaatgcagtggcattcatagggacatgggagtccatgtatctcgtatt
caatctattacattggatgatttaggaacatcagaattgctgcttgctcgttctgttggc
aatgataacttcaatgacatcatggaggataaacttgaaagcgagatgaaaccgacgcca
agcagtaacatggaggagcgaaagtctttcattcgtgggaaatacatctctcgtaaatac
gttgtccatacatgtgctgatgatccagatgctcttactgatgaattgggacaagctatt
cgatcatgtgatgtattctcattgctacaactgtgggcagaaggagcagacatgtgtgct
ccattacctggatatgatgacgctgaaactgcattacatgttgctgtctcgatgcccaac
catgattgctctggtacagtgttgccgctggtcgatttccttgcacagaacatagggagt
ggcatgaacaagaaaaccatatctggcaacactgcactgcacatctgtgcagagatgaac
cagacagaatgcatgaagctgctgcttagaagcaaagcgagcccagatattgaaaacgct
cgaggtgaaacagctctccagatcactaggagaatggatcatcccggatgcgaggagatc
ttggagcaagcagcatccggaaagtttagatccatcgtacatattaatatagattggaat
ctcacttttaatgatgaggacgactttataagcgacgatgatttggacgacaaggcattg
ctatcattgcctcaacaatttataggaatgtctcctgccaagacaaacaacaatagcggt
gattcgcatcgacaccgtcctacttcatttaaagagcgaacaaggcctttacctgacgtg
ccacccccgccgccacgtggccctccgcctgccgtgccacaacacgcatcagctgctgtg
ccacgcgctcggagccacacggctgcaccagggagcatagaccccaggaaatcaggtatc
gagggtcggccgcccgcaccagccataccaaacaaaccagaccttccattaaaatccaca
cctcgttcatcatcgttggttactgctaatatttacccactacaagttcctactaatgat
ataagaagggaaagcactcctgaaatccccttaaaatcagtcactagtctgcgaaacact
agatttgcctcctttggcggcaaacggcgcaaatcgaaacagatctcgggtttaaagccg
ggacagccaggttctatagagaaatctcggtctctcccacgaaactcgagcccttcagat
ttacgtccagatccaaatagaagcgatgccccagtaccgttgccaagatcttcgcaaatc
ccaccaccaacaccaagacctaaacgtgtgcgcgccatttatgactgcgaggctgacaac
caagacgagttaacattcgtggaaaacgagataattgtagttactggggtggaggaccag
gattggtgggttggtcacgtggagcatcagccccaccgggtcggggtattccccgtcagt
ttcgttcatattcttagtgacggcgccccctag
DBGET
integrated database retrieval system
