Ciona intestinalis (yellow sea squirt): 751571
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Entry
751571 CDS
T01056
Symbol
zf(an1/a20like)-2
Name
(RefSeq) zinc finger protein 2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cin03009
]
751571 (zf(an1/a20like)-2)
03012 Translation factors [BR:
cin03012
]
751571 (zf(an1/a20like)-2)
Enzymes [BR:
cin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
751571 (zf(an1/a20like)-2)
5.6.2.5 RNA 5'-3' helicase
751571 (zf(an1/a20like)-2)
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
Other ribosome biogenesis factors
751571 (zf(an1/a20like)-2)
Translation factors [BR:
cin03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
751571 (zf(an1/a20like)-2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
AAA_19
R3H
Viral_helicase1
UvrD-helicase
nSTAND3
ResIII
zf-AN1
DEAD
AAA_16
AAA_22
NPHP3_N
AAA
NAT10_TcmA_helicase
T2SSE
nSTAND_NTPase5
AAA_31
AAA_25
NTPase_1
CbiA
UvrD_C_2
SRP54
MeaB
ABC_tran
Flavi_DEAD
DnaB_C
XAF1_C
Zot
PhoH
RuvB_N
AAA_18
SLFN-g3_helicase
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
751571
NCBI-ProteinID:
NP_001041463
Ensembl:
ENSCING00000005102
UniProt:
Q1RLC0
LinkDB
All DBs
Position
14
Genome browser
AA seq
1048 aa
AA seq
DB search
MLIEEFVSKHLDLLAEEHAAEVEENRAGNATLSQSVLKRKGLCIPKLEVTGVKTGLYGRT
VAKFGLKSADKSLPFNVFKTGDIVGIDQVQSETSGSGIVSHTSDKHISVAFEGSEMRDTL
DSLAHNRNSVALIKLANEVTYKRLKRALEDLKKYSDGPSQHLIEVLFGDTKPQQFNLQEL
TFVNQNLNECQHNAVKFALSQSELAIIHGPPGTGKTTTVVEVIAQLVKAGRKVLACAPSN
VAVDNLVEKLSSISVDKVSGGKMSIVRLGHPARMLEKEVKQLSLDALVSSSDAAAIVRDV
RSDIEAVQKSLSRCPDKGKRFSLRQERKLLFSELKQRENKALNEILSSADVILATNVGAH
AKGPLQHLPHDYFDDVIIDECGQSLEAACWISLLRARRCILAGDHLQLPPTIISHKAAAN
GLATTLLERMINLQGDSVVSMLTEQYRMHRDIMHWASKKMYDGKLTANCKVQCHLLSDMP
GVDNTEDTRLPLLLVDTAGCEMYESESEESISKANTGEAMIVCSHVQTLVKAGVKESDIA
IISPYNLQVDLLRQSLKEKHPNIEIKSVDGFQGREKEAVILTLVRSNLDREIGFLSDKRR
LNVAVTRARRHLAVVCDSTTVCSDNFIKSLIDHITEHGDIRTGFEYLNDNENFQGFENLK
PVKQKQTGNSKKKEQKTTKQEPTPLTLWEIKEKYKKILLQLLEWQKTQTDPPETTFFDFS
KETLQQIVTENCSLAKTKILVVRKAQDSLEIAFPSILNSAERKAVHELCEEMSLGHGSLG
EDKDRHVVVSFRKQNTSSLETVTPATNTLEATGGKKQKESSNTEKVLPISQPKSVPTKKD
IGKKITPVSTDLPKEVPHQGTLSNVPYSICSQCGKNLPEDNMTMHQIHCERIMRMKQETK
SLKIDQQQKIHLKSAKSKKKKISKQAAKKHNTDIGDDFDTLLNEAISSNKVCCHGNCHTY
VTTTGQHCPICKKTFCLKHHLPEVHGCGMQAHINARRQISRDGVLYNGGGVPDRIPDPTK
RAQLKKRLDAKVKVLESDRKVGKSKKNK
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgttgattgaggaatttgtgtcgaaacatcttgatctacttgctgaagaacatgcagca
gaagttgaggaaaatcgagctggaaatgcaactttatctcagtctgttttaaaacgaaaa
ggcttgtgcatacccaaactggaagtgacaggtgttaaaactgggctttatggtagaact
gttgcaaagtttgggttgaaatcggcagacaagtctttgccatttaatgtttttaaaaca
ggtgacattgttggtatcgaccaggtgcaatcggaaacctctggatcgggtattgtgtcg
catacaagcgataaacatatctctgttgcatttgaaggcagtgagatgagagatacattg
gactctcttgctcacaacagaaattcagttgcgctcataaaacttgcaaacgaagttact
tacaagagactaaaaagagcgttggaggatttaaagaaatattctgatggtccttctcaa
catttgattgaagttttgtttggagatacgaaaccacaacagtttaatttgcaagaattg
acttttgtcaaccaaaatttgaacgaatgccaacacaatgctgtgaaatttgctttatcg
caaagtgagcttgcaataatacatggacctcctggaactgggaaaacaaccactgtggtt
gaggttatagcacaacttgtaaaagcaggcagaaaggtgttagcttgtgctccctccaat
gtagctgtcgataatttggttgaaaagttgtccagcatttcagttgataaagtcagtggt
ggtaagatgtccattgtaagacttggccaccctgcaaggatgctcgaaaaggaagtcaaa
caactctcattggatgcgttagtgtccagtagtgatgctgctgctattgttagagatgtg
aggtcagacattgaagctgtacagaaaagtctatcaaggtgtcctgataaagggaagaga
ttttcactaagacaggagcggaaattgctgttttctgaactcaagcagcgtgaaaataaa
gcccttaatgaaatcttgtcatcagctgatgtcatacttgccactaatgtaggggcccat
gcaaagggaccacttcagcatttaccacatgactactttgatgatgtcataatagacgaa
tgtggtcaatcgctcgaagcagcttgttggatatctttactacgtgcacgacgatgtata
cttgccggtgatcatttgcaactcccaccaactataatatcacacaaagccgcagctaat
ggtttggcaaccacattgcttgaacgcatgataaacttacagggtgattcagttgtgtct
atgctaacagagcaatacagaatgcacagagatattatgcattgggcttctaagaaaatg
tatgacggaaaattaactgcaaactgtaaagtacagtgtcacttattaagtgatatgcct
ggtgtagataacacagaagatacaagactaccattgttacttgtagatactgctggctgt
gaaatgtacgagtcagaatctgaagaaagcatttcaaaagcaaacacaggagaagcaatg
atagtatgttcacatgtacaaaccttggtaaaagctggggttaaggaatcagatattgct
ataatatctccgtataacttacaggttgatctactgagacagtcactaaaagagaaacat
cctaatattgaaattaaatcagttgatggatttcaggggagagaaaaagaagcagttatt
ctcactctagttcgttcaaatttggatagagaaataggatttctatcggacaaaaggcgt
ttaaatgttgcagtcacaagagcacggcgccacctagctgttgtgtgcgattcgacgaca
gtttgcagcgataattttatcaaatcactaattgatcatataaccgaacatggggatatt
cgtactggttttgaatacttgaatgataacgaaaatttccaaggctttgaaaatctaaaa
ccagtgaaacaaaagcagactggaaatagcaagaaaaaggaacaaaaaacgactaagcaa
gaaccaactccactaacactgtgggaaattaaggaaaaatataagaaaatcttactgcag
ctcctggaatggcagaaaacacagactgatccacccgaaactacattctttgatttttca
aaagaaactttgcagcaaattgtgactgaaaattgctctttggctaaaactaagatttta
gttgtaaggaaagcacaggatagtttagaaatagcgttcccgtctattctcaactcagct
gagcgtaaagcagtgcatgaattatgtgaagaaatgagtttgggccatggaagtttaggt
gaggataaggataggcacgtcgtggtcagtttccggaaacaaaatacctcaagtttggaa
actgtaactcctgctactaatacacttgaagcaactggcgggaaaaaacaaaaagaatct
tcaaatacagaaaaagttttgccaatttctcagccaaaatctgttccaacgaaaaaagat
attggtaaaaaaatcactccagtttcaactgacttaccgaaagaagtgccacaccagggt
acattaagtaatgtgccatactctatttgttcgcaatgtgggaaaaatctgccagaagat
aatatgacaatgcatcaaatacactgtgagagaataatgagaatgaaacaagaaacaaaa
agtttaaaaatagatcaacaacaaaaaattcacctaaaatctgccaagtcaaagaaaaag
aaaatatctaaacaagctgctaagaaacacaatactgatattggagatgattttgacaca
ttgttaaatgaagccatatcgtcaaataaagtttgttgtcatggcaactgtcatacctac
gtaaccactactggccagcattgcccaatatgcaagaaaactttctgtttaaagcatcat
ttaccagaagttcatggttgtggcatgcaggcacacattaatgcccgtcgtcaaataagt
agagatggtgttctgtataacggtgggggggtgccggatcgaatccctgaccctacaaaa
cgggctcaactcaaaaaacgactagatgcaaaagtaaaagtccttgagagtgataggaaa
gtgggaaagagtaaaaaaaataaataa
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