Ciona intestinalis (yellow sea squirt): 778551
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Entry
778551 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC778551
KO
K09361
BarH-like homeobox
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778551
Transcription factors [BR:
cin03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
778551
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
PigD_3rd
Motif
Other DBs
NCBI-GeneID:
778551
NCBI-ProteinID:
XP_002120788
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All DBs
Position
5
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AA seq
405 aa
AA seq
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MLVTVNALTGSLPQRDIPTPTKRRTSFLIRDILGEDNSSSSKRKIEAKHNNNLKNNLRCS
DCDYQKRCRVENTYRKYSLELDEEFKDMFHSTGFYTHSHREATPPFSNQESTCIPPNHFD
VPHYTGQRLVLSNDCKPPKRTDLGIDNRCRDNSYSSLHLNAQHEGWIHPPTLQSTLPYVD
LSYVYNIRPGTIRLPALPLLMFAPETNAMSYSAIRDDTTTKMNRPNSVCHDVKQKRTDGD
ESAQSDCDSKPPNTPSPVSLSSSCEYVAYHEQSSPKGSSHDFHQKKLQKKPLIQLPAYLR
SRIGGTATSDSVTSPGPIVKSKKCRRSRTVFTELQMMGLEKRFERQQYLSTPDRVELAEL
LGLSQLQVKTWYQNRRMKWKKQVLQGGGKEPPTKPKGRPRKIRTE
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgttggtcactgttaatgcgctaacaggttctcttcctcaacgtgatattccaacaccg
acaaaaaggagaacatcttttttaatccgagacattctaggtgaagataattcgtcttca
tcgaagaggaagatcgaggccaaacacaataataatttaaaaaacaatttacgctgttct
gattgtgattatcaaaaacgttgcagggttgaaaacacatacagaaaatatagtttagaa
ctcgatgaagaatttaaagacatgttccacagtacaggtttctatacacactcccaccga
gaagccacgccgccattttccaaccaggagtcaacatgcataccgcccaaccatttcgat
gtacctcattatacaggacagcgtttggttctgtccaacgactgtaaaccgccaaaaaga
actgacttaggaattgataatcgatgtcgggacaacagctattcctcacttcacttaaac
gctcaacatgaaggttggatacatccaccaacgctccagtcaactctaccttacgttgat
ctcagctatgtttacaacattagaccgggaactatacggctacctgcattgccacttcta
atgtttgcaccggaaacaaatgcgatgtcgtattcagcgatacgagatgatacgacgaca
aaaatgaatcgaccaaactctgtctgtcacgatgttaaacaaaaaagaacggatggtgat
gaatcggcacagagtgattgtgacagtaaaccgcccaacacaccatcacccgtatcttta
tcatcatcatgtgagtatgtagcatatcacgaacaatcgtcaccaaagggatcatcacat
gacttccaccagaagaaacttcaaaagaaacctctcatccaactccccgcttaccttcgg
agtcgtattgggggaactgcaacctccgattctgttacatctccaggaccaattgtaaaa
agcaagaaatgtagaagaagccgaacagtttttactgaattacagatgatgggactggag
aagcgcttcgaacgacaacaatatctttccaccccagatcgggttgagttggccgaactc
ttaggactaagtcagttgcaagtaaagacttggtatcaaaaccgtcgaatgaaatggaag
aaacaggtattgcagggtggtggaaaagagcccccgacgaaacctaaaggtcgaccgcgc
aaaatacgaacagaataa
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