Ciona intestinalis (yellow sea squirt): 778555
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Entry
778555 CDS
T01056
Symbol
bmp5/7-like
Name
(RefSeq) transforming growth factor beta superfamily signaling ligand
KO
K16621
bone morphogenetic protein 7
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
778555 (bmp5/7-like)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cin04052
]
778555 (bmp5/7-like)
00536 Glycosaminoglycan binding proteins [BR:
cin00536
]
778555 (bmp5/7-like)
Cytokines and neuropeptides [BR:
cin04052
]
Cytokines
Transforming growth factors (RSTK binding)
778555 (bmp5/7-like)
Glycosaminoglycan binding proteins [BR:
cin00536
]
Heparan sulfate / Heparin
Morphogens
778555 (bmp5/7-like)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
778555
NCBI-ProteinID:
NP_001071664
Ensembl:
ENSCING00000003777
UniProt:
Q4H3U4
LinkDB
All DBs
Position
2:complement(5221496..5228461)
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AA seq
660 aa
AA seq
DB search
MTCHRNKAHLRSELEPTGYDCQSVCSCKIGHKWSMRIASEDMRQHSDIDTMDLSKTSSRD
CCELIYRKKLKLRRRRFELPTAPQFYIYSTLLLILFISVISSDAYVIEHEGPTQSHLYRR
LAGKERREYQRQILSLLGLNHRPRPANQSYQVRTSAPLYMLGLYNSASGGVAERPIGHTQ
AEIDPTRNQLEGATDLGGGVGFDRYSLNRRTMPNGVFRGGVSTTLNRYLEEGRIFNEVGI
FEENSDQSRQPQSFHATGGPYNSLATNQVEKRLLDDSDLVMSFVNTKQPRGVDDETFSSR
ELRRILIRHRSFYFEMRHVGENERLSAAKFRLYKERSEYGTSNQTLRVNVYQAMPDARGR
PTVYLLGTRLVGTSEEGWLVYDVTSAVRDWIITGTNVGLKVTVETLDGSYLKPQKVGVVG
RKGEAAKQAFLVAFFAQGEDSQREQITRRFRRSPPDAEEAEEDEEEDDWEDESAPGDSEN
THTNDTNNQTWRAPGSAASEVVYDRGTRSDITSNTVPGNDDAPERERTMWRRKARRRKKK
NRSKKKKTPSRRKKSEPCHRKIFNVRFKDIGWEDWLIAPQHYAAYRCSGACAFPLNHHTN
ATNHAIIQSMVSTMIRTASVPMPCCTPTELLSLDFLYFDENENVMYRRFKDMVVVSCGCN
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgacttgtcatcgcaataaagcgcacctgcgcagtgaactggaacctactggttacgat
tgccagtcagtatgcagctgtaagatcggacacaagtggagcatgcggatcgcaagtgag
gacatgcgacagcattcagatattgacactatggatctaagtaagacttcaagtcgagat
tgctgtgaactgatataccgtaaaaaactgaagcttaggcgacggagatttgaactgccg
acagcgccgcaattttatatatattctactttgctcttgattttatttattagcgtcatt
tcttcggatgcgtacgtcattgaacacgagggtccaactcaatcacacctttacagaaga
cttgcaggtaaggagaggcgggaatatcaacgtcagatcttatctttgctgggactcaat
catcgtcctcgacccgccaatcaaagctaccaagttcgcacctctgcgccactgtacatg
cttggtctatacaactcggcgtcaggcggggttgctgaaagaccgataggtcacacccaa
gcggaaatcgatcccacgagaaaccagttggaaggtgcaacagacttgggcggtggcgtg
ggattcgatcggtattcgcttaaccgaaggacgatgccaaatggggttttcaggggcgga
gtatcgaccactttgaaccgatacttagaggaaggtaggatttttaacgaagtcggaatt
ttcgaagagaattctgaccagagtcggcaaccacaaagttttcatgcgacaggagggccg
tacaacagcttggctacgaaccaggttgaaaagaggttgctggacgactctgatctcgtc
atgagttttgtgaacacaaagcaaccgagaggtgtcgatgatgagacgttctcgtccaga
gagttgcggagaattttgattcgtcaccgatctttttatttcgagatgcgtcacgtggga
gagaacgagcgactctcagcggccaaatttcgtctgtacaaagagagaagcgagtatgga
acaagcaaccaaacactgagagtcaacgtgtaccaagcaatgccggatgctcggggaaga
ccaactgtgtatctgcttggcacccgattggttgggacttcagaggaaggatggttggtt
tatgacgtcacaagcgctgtacgcgactggatcattactggaactaacgtgggcttaaaa
gtcaccgttgaaaccctagacggttcttacttgaagccgcagaaagttggagttgtgggc
aggaagggagaggctgcaaaacaagcttttcttgtcgccttcttcgcacagggagaagac
tctcagcgtgaacaaataaccaggaggttcaggagaagtcctccggatgcagaagaggcg
gaagaagacgaagaggaggatgactgggaagatgaatcagctccgggggattcagaaaat
acgcacacaaacgacacaaacaatcaaacctggagagccccaggttctgctgcttcggaa
gttgtgtacgacagggggacgcgttcggacattacaagcaacactgttcccggaaatgac
gatgcaccggagagagagagaacgatgtggagaagaaaggcgagaagacgaaagaaaaaa
aatcgttccaagaagaaaaaaacgccatccagacgaaaaaaatccgaaccttgccataga
aaaatattcaatgtccgttttaaagatattggctgggaggactggttgattgcgccacaa
cactacgcggcttacaggtgctcaggtgcttgcgcattccctcttaatcaccacacgaac
gctacaaatcatgccattattcagtcgatggttagcacaatgattaggacagcctcagta
cctatgccatgttgtacacccaccgaactacttagtcttgattttctgtattttgacgag
aacgagaatgtaatgtaccgaaggttcaaagacatggttgtcgtgtcatgcgggtgcaac
tga
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