Ciona intestinalis (yellow sea squirt): 778563
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Entry
778563 CDS
T01056
Name
(RefSeq) chordin
KO
K04657
chordin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
778563
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Gene cluster
GFIT
Motif
Pfam:
CHRD
VWC
Amnionless
DUF5577
Motif
Other DBs
NCBI-GeneID:
778563
NCBI-ProteinID:
XP_026690585
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All DBs
Position
6:1223348..1232076
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AA seq
1018 aa
AA seq
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MNRDVTGKRLRHSGGTLSRDLVDFTISKSHFEQEQMMMTSCYYVTVVFIAMTSGICAGFL
QIHPAEEALPSNNPRGCVFGRQFHVIGSSWHPNLGRPFGIMYCVTCQCVKETTGRFKPDG
QPKEVTRVTCHDVRKDCPHVTCKGAKVPRGGCCKVCPDDTDTIVTSAEEFSSKNGDVPLP
LDITEEKSINHDDSKAGVDEKTKSYVALLTSNDGGPLLRATFNLHRDNLHFTIQYLRSTK
PTIIEMLTNDDVTIYTHVTEMSPKPGQPIVCGVWRNLPKHVVSSLDKRLLTLRAVFVQTG
ANMTSQGQIIRHRALSRETFSSILSTTPLDGASGAIAMITLGRHRFNKLHFAILLRRSSV
TSQPTTITVRLLNNQNRTLRSTEKTLQPSSNELADVWSTNSEILRRLGDGSLHIQMVART
TGSRDKQSYIGSVRAKTTCDLLQAVLSGSDCSLPASTGAAGSAILNINSDNTVSYKVALV
GISSRVTSISLLGDYRKKRTRVVADLTPQFVNGKAQGRLENLNGKEIHLLLSNRVRVAVE
TEQSNSGELGGHVTSLLYGGHQARYKGLPIPLAGSLVRPPVFTGAAGHVWLELNEECHLY
YEIVVSGLSKERDTTLAAHLHGLAEIAETETGHKQLLKGFYGKEARGILRELSSEIYEHL
NQGNAFVQIATKSNPGGEIRGRVHIPNTCSRTIVNKANHKQDTSDTDQNSLSVPSSDVTT
SRVTDLDAVVHDGVIPTYTERRLELDPSACYVIDEWKPHGSEWAPDYDPKCTICVCESGS
SLCDPVYCPPLECGRPVATEGSCCPVCNDGFGEIPTKHDDGASIGSLFGSPFTQLDQKED
EKEKEKEGCYYGGDGQIHAIGSWWHPYFKRFGHVSCVNCTCRPDGEIVCGKITCPPVTCS
NPIKQNPRDCCKTCPEVTRHELRHESRDHRMQDDSVSRMCQFGRELRAPGEKWTLGYLGR
RNLECIECECATHGVKHKCRKNCPAVSHECSRVERNVSGCCPWRCADRQRSTERFPFS
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtgacgtcacgggaaaaaggctacgtcacagtgggggtactttatctagggat
ctcgtagatttcaccatatcgaaatctcacttcgagcaggaacaaatgatgatgacgtca
tgctattacgtcacggtggtattcattgctatgacgtcaggtatatgtgctggctttctg
cagatacatccagcagaagaagcattgccgtctaataacccgcgaggttgtgtatttggt
cgtcagttccacgtcatcggatcatcatggcacccaaaccttggtcgtccatttggaatc
atgtattgtgtcacgtgtcagtgcgtcaaagagaccactgggcgtttcaaaccagacgga
caaccaaaggaagttactcgggtcacgtgtcatgacgtaagaaaggactgcccccacgtc
acgtgcaaaggggccaaggtacccaggggaggatgctgtaaagtttgcccagacgataca
gatacaattgtgacgtcagccgaagaattttcatcgaaaaatggtgatgttccgctgcca
ttggatatcactgaagaaaaatcaattaaccacgacgactcaaaggctggtgttgatgag
aagacaaaaagttatgttgcactgttaaccagcaatgatggtgggccattgttacgagct
acgtttaacctgcacagggataatctgcattttacgatccagtatttgaggtcaaccaaa
cccaccattatagaaatgctgactaatgatgatgtcacaatatacactcatgtaactgaa
atgtcaccaaagccaggacaacctattgtttgcggggtatggcgtaatctaccaaaacac
gttgttagctccttagataaaaggttgttgactctcagagctgtttttgtccaaactggt
gccaatatgacatcacaaggtcaaataatacgacacagagcattgagtcgagaaactttt
agttcgattttatccacgacacctctagatggagctagtggagcaattgcgatgatcacc
cttggccgacatcgattcaataaacttcattttgccattttactcagacgatcttctgtg
acatcacaacccaccacaatcactgtgcgattactcaacaatcaaaacagaacgttgcga
tcaaccgagaaaactcttcaaccctcaagtaatgagctagctgatgtgtggtcgacaaat
tctgaaatccttcgaagattgggtgatggttcacttcatatacagatggttgctaggaca
acagggtcacgtgataaacaaagctacatcggcagcgtgagagcaaaaacaacttgtgac
ctgttgcaagctgttttatctggaagtgactgtagcctaccagccagtacaggagcagct
ggatccgcgattctgaatattaattctgacaacactgtttcttacaaggtggcgctagtg
ggtatttcaagtcgggtgacctcaatatcactgcttggagactacagaaagaagcgaaca
cgcgtagtagccgatctcaccccacaatttgtgaatgggaaagcccaaggaagactggaa
aaccttaatgggaaagagatacatcttttactaagcaaccgtgtgcgtgttgccgtggaa
actgaacaaagcaatagtggagagctgggtggtcatgtgacttctctcctttatggaggc
caccaagctagatataaaggccttccaattcctcttgctggttctctagtacgaccccct
gtattcactggggctgcaggtcacgtttggcttgaactgaatgaagaatgtcatctttat
tatgaaattgttgtttctggactaagcaaagagcgtgacacaacattagccgcacattta
cacggtctcgctgaaatagctgaaacagaaactggacataaacaacttttgaaaggtttc
tatggaaaagaggcgcgtggaatattaagagagttatcttcagaaatatatgaacatctc
aaccagggcaatgcttttgtacagattgcaacaaagtcaaacccaggtggagaaatacgt
ggtcgtgttcatataccaaacacttgctccaggacaatagttaacaaggctaaccataaa
caagatacttcagacacagaccagaattcattaagtgttccaagctctgatgtcaccacg
tcacgggtgactgatctcgatgcagtggtgcatgacggggtaatcccaacatacaccgag
cgtcgtttggagcttgacccatccgcttgttacgtcatagacgaatggaaaccccatggt
agtgaatgggcaccagattacgacccaaaatgcacaatatgcgtttgtgagtccggtagt
tcactttgcgatcctgtttactgcccgccactagagtgcggcagaccagtggccaccgaa
gggagctgttgtccagtgtgtaacgatgggtttggggaaataccaaccaagcatgatgat
ggggcttctataggatctctgtttgggtctccatttacacaactcgatcaaaaagaagac
gagaaagaaaaagagaaagaaggttgctactacgggggcgatggacaaatacacgcgata
ggttcatggtggcatccatattttaaacgattcggccacgtatcgtgcgtgaactgcacg
tgtaggccagacggtgaaattgtgtgtggaaaaattacgtgcccgccagtaacgtgctca
aatcctatcaaacaaaatccgagagattgctgtaaaacttgcccagaggtcacacgtcac
gaactacgtcacgaatcacgtgaccatcgcatgcaggacgacagcgtgtccaggatgtgt
cagtttggtcgtgagctacgagcacccggggaaaaatggacgcttggatatctgggcaga
agaaaccttgaatgtatagaatgcgaatgtgctacccatggtgtgaaacacaagtgccgc
aaaaactgtccagctgtcagtcatgaatgcagtcgagtggaacgaaacgtttccggttgc
tgcccatggcgttgcgcggaccgtcagaggtcgaccgagagatttccgttttcgtaa
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