KEGG   Ciona intestinalis (yellow sea squirt): 778563
Entry
778563            CDS       T01056                                 
Name
(RefSeq) chordin
  KO
K04657  chordin
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cin00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    778563
SSDB
Motif
Pfam: CHRD VWC Amnionless DUF5577
Other DBs
NCBI-GeneID: 778563
NCBI-ProteinID: XP_026690585
LinkDB
Position
6:1223348..1232076
AA seq 1018 aa
MNRDVTGKRLRHSGGTLSRDLVDFTISKSHFEQEQMMMTSCYYVTVVFIAMTSGICAGFL
QIHPAEEALPSNNPRGCVFGRQFHVIGSSWHPNLGRPFGIMYCVTCQCVKETTGRFKPDG
QPKEVTRVTCHDVRKDCPHVTCKGAKVPRGGCCKVCPDDTDTIVTSAEEFSSKNGDVPLP
LDITEEKSINHDDSKAGVDEKTKSYVALLTSNDGGPLLRATFNLHRDNLHFTIQYLRSTK
PTIIEMLTNDDVTIYTHVTEMSPKPGQPIVCGVWRNLPKHVVSSLDKRLLTLRAVFVQTG
ANMTSQGQIIRHRALSRETFSSILSTTPLDGASGAIAMITLGRHRFNKLHFAILLRRSSV
TSQPTTITVRLLNNQNRTLRSTEKTLQPSSNELADVWSTNSEILRRLGDGSLHIQMVART
TGSRDKQSYIGSVRAKTTCDLLQAVLSGSDCSLPASTGAAGSAILNINSDNTVSYKVALV
GISSRVTSISLLGDYRKKRTRVVADLTPQFVNGKAQGRLENLNGKEIHLLLSNRVRVAVE
TEQSNSGELGGHVTSLLYGGHQARYKGLPIPLAGSLVRPPVFTGAAGHVWLELNEECHLY
YEIVVSGLSKERDTTLAAHLHGLAEIAETETGHKQLLKGFYGKEARGILRELSSEIYEHL
NQGNAFVQIATKSNPGGEIRGRVHIPNTCSRTIVNKANHKQDTSDTDQNSLSVPSSDVTT
SRVTDLDAVVHDGVIPTYTERRLELDPSACYVIDEWKPHGSEWAPDYDPKCTICVCESGS
SLCDPVYCPPLECGRPVATEGSCCPVCNDGFGEIPTKHDDGASIGSLFGSPFTQLDQKED
EKEKEKEGCYYGGDGQIHAIGSWWHPYFKRFGHVSCVNCTCRPDGEIVCGKITCPPVTCS
NPIKQNPRDCCKTCPEVTRHELRHESRDHRMQDDSVSRMCQFGRELRAPGEKWTLGYLGR
RNLECIECECATHGVKHKCRKNCPAVSHECSRVERNVSGCCPWRCADRQRSTERFPFS
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgaaccgtgacgtcacgggaaaaaggctacgtcacagtgggggtactttatctagggat
ctcgtagatttcaccatatcgaaatctcacttcgagcaggaacaaatgatgatgacgtca
tgctattacgtcacggtggtattcattgctatgacgtcaggtatatgtgctggctttctg
cagatacatccagcagaagaagcattgccgtctaataacccgcgaggttgtgtatttggt
cgtcagttccacgtcatcggatcatcatggcacccaaaccttggtcgtccatttggaatc
atgtattgtgtcacgtgtcagtgcgtcaaagagaccactgggcgtttcaaaccagacgga
caaccaaaggaagttactcgggtcacgtgtcatgacgtaagaaaggactgcccccacgtc
acgtgcaaaggggccaaggtacccaggggaggatgctgtaaagtttgcccagacgataca
gatacaattgtgacgtcagccgaagaattttcatcgaaaaatggtgatgttccgctgcca
ttggatatcactgaagaaaaatcaattaaccacgacgactcaaaggctggtgttgatgag
aagacaaaaagttatgttgcactgttaaccagcaatgatggtgggccattgttacgagct
acgtttaacctgcacagggataatctgcattttacgatccagtatttgaggtcaaccaaa
cccaccattatagaaatgctgactaatgatgatgtcacaatatacactcatgtaactgaa
atgtcaccaaagccaggacaacctattgtttgcggggtatggcgtaatctaccaaaacac
gttgttagctccttagataaaaggttgttgactctcagagctgtttttgtccaaactggt
gccaatatgacatcacaaggtcaaataatacgacacagagcattgagtcgagaaactttt
agttcgattttatccacgacacctctagatggagctagtggagcaattgcgatgatcacc
cttggccgacatcgattcaataaacttcattttgccattttactcagacgatcttctgtg
acatcacaacccaccacaatcactgtgcgattactcaacaatcaaaacagaacgttgcga
tcaaccgagaaaactcttcaaccctcaagtaatgagctagctgatgtgtggtcgacaaat
tctgaaatccttcgaagattgggtgatggttcacttcatatacagatggttgctaggaca
acagggtcacgtgataaacaaagctacatcggcagcgtgagagcaaaaacaacttgtgac
ctgttgcaagctgttttatctggaagtgactgtagcctaccagccagtacaggagcagct
ggatccgcgattctgaatattaattctgacaacactgtttcttacaaggtggcgctagtg
ggtatttcaagtcgggtgacctcaatatcactgcttggagactacagaaagaagcgaaca
cgcgtagtagccgatctcaccccacaatttgtgaatgggaaagcccaaggaagactggaa
aaccttaatgggaaagagatacatcttttactaagcaaccgtgtgcgtgttgccgtggaa
actgaacaaagcaatagtggagagctgggtggtcatgtgacttctctcctttatggaggc
caccaagctagatataaaggccttccaattcctcttgctggttctctagtacgaccccct
gtattcactggggctgcaggtcacgtttggcttgaactgaatgaagaatgtcatctttat
tatgaaattgttgtttctggactaagcaaagagcgtgacacaacattagccgcacattta
cacggtctcgctgaaatagctgaaacagaaactggacataaacaacttttgaaaggtttc
tatggaaaagaggcgcgtggaatattaagagagttatcttcagaaatatatgaacatctc
aaccagggcaatgcttttgtacagattgcaacaaagtcaaacccaggtggagaaatacgt
ggtcgtgttcatataccaaacacttgctccaggacaatagttaacaaggctaaccataaa
caagatacttcagacacagaccagaattcattaagtgttccaagctctgatgtcaccacg
tcacgggtgactgatctcgatgcagtggtgcatgacggggtaatcccaacatacaccgag
cgtcgtttggagcttgacccatccgcttgttacgtcatagacgaatggaaaccccatggt
agtgaatgggcaccagattacgacccaaaatgcacaatatgcgtttgtgagtccggtagt
tcactttgcgatcctgtttactgcccgccactagagtgcggcagaccagtggccaccgaa
gggagctgttgtccagtgtgtaacgatgggtttggggaaataccaaccaagcatgatgat
ggggcttctataggatctctgtttgggtctccatttacacaactcgatcaaaaagaagac
gagaaagaaaaagagaaagaaggttgctactacgggggcgatggacaaatacacgcgata
ggttcatggtggcatccatattttaaacgattcggccacgtatcgtgcgtgaactgcacg
tgtaggccagacggtgaaattgtgtgtggaaaaattacgtgcccgccagtaacgtgctca
aatcctatcaaacaaaatccgagagattgctgtaaaacttgcccagaggtcacacgtcac
gaactacgtcacgaatcacgtgaccatcgcatgcaggacgacagcgtgtccaggatgtgt
cagtttggtcgtgagctacgagcacccggggaaaaatggacgcttggatatctgggcaga
agaaaccttgaatgtatagaatgcgaatgtgctacccatggtgtgaaacacaagtgccgc
aaaaactgtccagctgtcagtcatgaatgcagtcgagtggaacgaaacgtttccggttgc
tgcccatggcgttgcgcggaccgtcagaggtcgaccgagagatttccgttttcgtaa

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