Ciona intestinalis (yellow sea squirt): 778566
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Entry
778566 CDS
T01056
Symbol
coe
Name
(RefSeq) transcription factor protein
KO
K09103
early B-cell factor
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778566 (coe)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
778566 (coe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
778566
NCBI-ProteinID:
NP_001071671
UniProt:
Q4H3S4
LinkDB
All DBs
AA seq
449 aa
AA seq
DB search
MRRVLLTHEIMCSRCCDKKSCGNRNETPSDPVVIDRYFLKFFLKCNQNCLKNAGNPRDMR
RFQVVVSTTVHVDGHVLAVSDNMFVHNNSKHGRRARRVDPSEASPTIKAINPAEGWTTGG
ATVVIVGENFFDGLQVVFGSMVVWSELITQHAIRVQTPPRHLPGVVEVTLSYKNKQFCSG
APGRFVYTALNEPTLDYGFQRLLKTVPRHPGDPERLPKEIILKRAADVMEAVISRQYAPP
SQMPPSAGITPPAPHLAAAPCAPPGSFVPQSASAAMAVAMNGYAAAAVSSQFGGTPDRFD
TGSDSGYSRGNSVSPRNGYSPQTTPHSLNSGSIGSMVGLTTVGAVPAPAPYHCAPSFNSY
SSASGPTFTNMNNTSPGLFSGSGIIPPSPHNGMNPLPSSGTTPGIFSFSPANMISAAKQK
SAFAPVHRPHNSPSPLAPSNGNIALNGYS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgggttttgctcactcatgagatcatgtgcagccgctgctgtgacaagaagagt
tgcgggaacagaaacgaaactccatccgacccagtggtgattgacagatacttcttaaaa
ttctttctcaagtgcaaccaaaactgtttaaagaatgctggaaatccacgagacatgcga
agatttcaggttgtggtctcaacaactgtgcatgttgacggtcatgtcttagctgtgtct
gacaacatgttcgtgcacaacaactcgaaacatggacgtcgagcgagaagggtcgaccca
tcagaagcttcgccaactatcaaagcaatcaacccagctgagggttggacaacaggagga
gcaacagttgttatagttggagaaaatttctttgacgggcttcaagttgtgtttggttca
atggttgtgtggagtgagttgatcacccaacacgcaatcagagtacagactccaccgcgc
catctaccgggcgtggtagaagtgactctgtcttacaaaaataaacaattctgcagtggt
gctccaggacgctttgtatacacagcgctcaacgaaccgacacttgattatggattccag
cgattactgaagactgtgccaagacacccaggcgaccctgagagactaccaaaggagatt
attctaaaacgagctgctgacgtcatggaagcggtgatcagtcggcagtacgccccgcca
agccaaatgcccccgtcagccgggatcacgcctcccgcaccccatctagcggccgcgccg
tgcgcgccacccggcagtttcgttccgcaatctgctagcgctgccatggccgtggcaatg
aacggttacgctgctgcagcggtttcttcacaatttggcggaacacccgatcggttcgac
accggaagtgattcaggttactcacgaggtaacagcgtttctccccgcaacggatattcc
ccccagacgacaccgcatagcttgaacagtggctcaattggtagcatggtggggctcaca
actgtaggcgcagttcctgccccagccccctaccactgcgcaccatcctttaacagttat
tccagcgcttcaggtcccacattcacgaacatgaacaacacgtctcctgggcttttttct
ggatctgggataattccaccttcgccccacaacggtatgaacccacttccgtcttcgggg
accacaccgggaatatttagtttttcacctgcaaacatgatatcagccgcaaagcagaag
agcgcatttgcccctgtacatcgtccacacaactcgcccagtcctctagcgccgtctaac
ggaaatatcgcactaaacggctatagctag
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