KEGG   Ciona intestinalis (yellow sea squirt): 778591
Entry
778591            CDS       T01056                                 
Symbol
ephrina-c
Name
(RefSeq) ephrin precursor
  KO
K05462  ephrin-A
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cin04052]
    778591 (ephrina-c)
   00536 Glycosaminoglycan binding proteins [BR:cin00536]
    778591 (ephrina-c)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cin00537]
    778591 (ephrina-c)
Cytokines and neuropeptides [BR:cin04052]
 Cytokines
  Growth factors (RTK binding)
   778591 (ephrina-c)
Glycosaminoglycan binding proteins [BR:cin00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   778591 (ephrina-c)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cin00537]
 Others
  778591 (ephrina-c)
SSDB
Motif
Pfam: Ephrin MUCL1 Mucin Dicty_REP
Other DBs
NCBI-GeneID: 778591
NCBI-ProteinID: NP_001071693
Ensembl: ENSCING00000005717
UniProt: Q4H3M0
LinkDB
Position
3
AA seq 264 aa
MIRSLAICFSLLLFQGEGNAKRRHHVIYWNTVMNPGLLSTSEHTYYVKIGEFLDILCPQN
SLMGITDGLEEPETFNLYNVTQTDFEQCSHGDNKNFIFACDRPERENKLTIKFQTISPSP
LGFRFQYCSEYYFVAASRDPNKRTNSCNKNSMRLRIFVECRETRHHKHDKKTTTASTTTT
TTLPTTTITKVRTTTSRKPRIVLPNVEHSNTTKSIPDKKPSEDPETLRQIKNRRRNNSSS
CLSFSINTLTLTFFVYVITTWVMS
NT seq 795 nt   +upstreamnt  +downstreamnt
atgatccgctcactggcaatttgcttcagtttgctgttgtttcaaggtgaaggaaatgcc
aagagacgtcaccacgttatctactggaacacagtaatgaacccagggttgctctcgacc
agcgaacacacttactacgtgaaaattggcgagtttcttgacattctatgcccacagaac
agcttgatggggataacggatggtctcgaagaaccagagacctttaacctgtacaatgta
actcaaacggattttgaacaatgcagccatggagataacaagaacttcatcttcgcttgc
gaccgaccggaacgtgaaaataagctcaccatcaagttccagaccatcagtccctcgcct
ctcggatttcgtttccagtattgctccgagtattactttgtggctgcgtctcgtgatcca
aacaaaagaacaaatagctgcaacaaaaactcgatgcgtttacgtatttttgttgaatgc
agagaaacccgccaccacaagcacgataagaaaacaacaacagctagtactaccacaacc
accacactcccaacaacaacaataaccaaagtacggacaacaacctccaggaagcctcgc
atcgttctacccaacgttgaacattcaaacacaaccaagtcaatacctgacaaaaaaccc
agcgaagaccctgaaactttaagacaaattaaaaatcgaaggcgaaataattcttcttcg
tgtctctctttttctataaatacgttgacattaacattttttgtttacgtcatcacgacg
tgggtgatgtcatga

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