Ciona intestinalis (yellow sea squirt): 778592
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Entry
778592 CDS
T01056
Symbol
ephrina-d
Name
(RefSeq) ephrin precursor
KO
K05462
ephrin-A
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cin04052
]
778592 (ephrina-d)
00536 Glycosaminoglycan binding proteins [BR:
cin00536
]
778592 (ephrina-d)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cin00537
]
778592 (ephrina-d)
Cytokines and neuropeptides [BR:
cin04052
]
Cytokines
Growth factors (RTK binding)
778592 (ephrina-d)
Glycosaminoglycan binding proteins [BR:
cin00536
]
Heparan sulfate / Heparin
Axon guidance molecules
778592 (ephrina-d)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cin00537
]
Others
778592 (ephrina-d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Dicty_REP
New_glue
DUF3597
Motif
Other DBs
NCBI-GeneID:
778592
NCBI-ProteinID:
NP_001071694
Ensembl:
ENSCING00000005716
UniProt:
Q4H3L9
LinkDB
All DBs
Position
3:complement(2802442..2806772)
Genome browser
AA seq
278 aa
AA seq
DB search
MATQFTYYLFTLCLICVNSQATVDRHVLYWNSVMTPGLKKNDYVMQVKMGQFMDILCPQR
SLMGITGPKEPTTFDLYNVTEDNYQQCNTGGHKNFIFACDRPERENKLTIKFQTISPSPL
GFRFQYCSEYYFVAVPRNGRRGKQSGCHKQSTRLRISVGCHETTTTTTTTTTTTTTTTTT
TTTTPKPKTSTANPDYEFIKKLLASTKDTQSSRDETFVPKLKSLLIKSSEKNSPVVLASS
LDQTSDNKGNAAPSHTSVFSTTLLVMLTSWVLRSLLLV
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcaatttacctactacctgtttactttgtgtctcatttgcgttaactcgcaa
gcaaccgtggatcgtcacgtcttgtactggaattctgtcatgacgccaggactaaaaaag
aacgattacgtcatgcaagttaagatgggtcaattcatggacatcctctgtcctcaacga
agcttgatgggtattacgggaccgaaagaaccgaccaccttcgatctttacaatgtaacc
gaagataattaccaacaatgtaacactgggggccacaagaacttcatcttcgcttgcgac
cgaccggaacgtgaaaataagctcaccatcaagttccagaccatcagtccctcgcctctc
ggatttcgtttccagtattgctccgaatattactttgtcgctgtaccacgcaacggaaga
agaggcaaacagagcggctgccacaagcaatcgaccagactccgtatctcggttggatgc
cacgaaacaacaacaacgactactaccactactactacgactactaccaccactactaca
actaccacaacccccaaaccgaaaacttccactgcaaaccctgattatgagttcatcaaa
aaacttcttgcgagcaccaaggacacccaatccagcagagacgaaactttcgtcccaaaa
ctcaaatcactcttgatcaaatcttctgaaaagaattctccagtggtattggcatcgagt
ttggaccaaacatcagacaacaaggggaacgcggcgccttctcacacctctgtgttcagc
accacgttgctggtcatgcttacatcgtgggtgcttcggtctttattgcttgtttag
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