KEGG   Ciona intestinalis (yellow sea squirt): 778592
Entry
778592            CDS       T01056                                 
Symbol
ephrina-d
Name
(RefSeq) ephrin precursor
  KO
K05462  ephrin-A
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cin04052]
    778592 (ephrina-d)
   00536 Glycosaminoglycan binding proteins [BR:cin00536]
    778592 (ephrina-d)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cin00537]
    778592 (ephrina-d)
Cytokines and neuropeptides [BR:cin04052]
 Cytokines
  Growth factors (RTK binding)
   778592 (ephrina-d)
Glycosaminoglycan binding proteins [BR:cin00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   778592 (ephrina-d)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cin00537]
 Others
  778592 (ephrina-d)
SSDB
Motif
Pfam: Ephrin Dicty_REP New_glue DUF3597
Other DBs
NCBI-GeneID: 778592
NCBI-ProteinID: NP_001071694
Ensembl: ENSCING00000005716
UniProt: Q4H3L9
LinkDB
Position
3:complement(2802442..2806772)
AA seq 278 aa
MATQFTYYLFTLCLICVNSQATVDRHVLYWNSVMTPGLKKNDYVMQVKMGQFMDILCPQR
SLMGITGPKEPTTFDLYNVTEDNYQQCNTGGHKNFIFACDRPERENKLTIKFQTISPSPL
GFRFQYCSEYYFVAVPRNGRRGKQSGCHKQSTRLRISVGCHETTTTTTTTTTTTTTTTTT
TTTTPKPKTSTANPDYEFIKKLLASTKDTQSSRDETFVPKLKSLLIKSSEKNSPVVLASS
LDQTSDNKGNAAPSHTSVFSTTLLVMLTSWVLRSLLLV
NT seq 837 nt   +upstreamnt  +downstreamnt
atggcaactcaatttacctactacctgtttactttgtgtctcatttgcgttaactcgcaa
gcaaccgtggatcgtcacgtcttgtactggaattctgtcatgacgccaggactaaaaaag
aacgattacgtcatgcaagttaagatgggtcaattcatggacatcctctgtcctcaacga
agcttgatgggtattacgggaccgaaagaaccgaccaccttcgatctttacaatgtaacc
gaagataattaccaacaatgtaacactgggggccacaagaacttcatcttcgcttgcgac
cgaccggaacgtgaaaataagctcaccatcaagttccagaccatcagtccctcgcctctc
ggatttcgtttccagtattgctccgaatattactttgtcgctgtaccacgcaacggaaga
agaggcaaacagagcggctgccacaagcaatcgaccagactccgtatctcggttggatgc
cacgaaacaacaacaacgactactaccactactactacgactactaccaccactactaca
actaccacaacccccaaaccgaaaacttccactgcaaaccctgattatgagttcatcaaa
aaacttcttgcgagcaccaaggacacccaatccagcagagacgaaactttcgtcccaaaa
ctcaaatcactcttgatcaaatcttctgaaaagaattctccagtggtattggcatcgagt
ttggaccaaacatcagacaacaaggggaacgcggcgccttctcacacctctgtgttcagc
accacgttgctggtcatgcttacatcgtgggtgcttcggtctttattgcttgtttag

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