Ciona intestinalis (yellow sea squirt): 778599
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Entry
778599 CDS
T01056
Symbol
err
Name
(RefSeq) nuclear receptor
KO
K08554
estrogen-related receptor gamma
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778599 (err)
03029 Mitochondrial biogenesis [BR:
cin03029
]
778599 (err)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cin03310
]
778599 (err)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
778599 (err)
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
778599 (err)
Nuclear receptors [BR:
cin03310
]
3. Estrogen like
3B. Estrogen-related receptor
778599 (err)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PFam54_60
Motif
Other DBs
NCBI-GeneID:
778599
NCBI-ProteinID:
NP_001071700
Ensembl:
ENSCING00000018200
UniProt:
Q4H3L1
LinkDB
All DBs
AA seq
515 aa
AA seq
DB search
MCSLLNSDDTLSSMLFIKQEPCSPLESSVNFNSSFNSSLSSSPESLCSDGGTYSPPTMVH
FGFPALFPSMPSPGDISLHFNSNFNNNRATSSGEEDVFEDFSSCMTSSESCSGEGLAGLM
PPSLSEYKSGIDSCDADSVLALVPPTSLVLKSPTTSESTGTPAPLSSSSTPPKRLCLVCG
DIASGYHYGVASCEACKAFFKRTIQGSIDYTCPAANDCEITKRRRKSCQSCRFSKCLRVG
MLREGVRLDRVRGGRQKYKRKIDANEMPYLVAVPAAAEPAPNVLSPNKILSHLLMAEPDK
LFAPHDHSATRSEISILTALCDLADRELVVIIGWAKHIPGFTVLSLADQMALLQSAWMEV
LVLGIVFRSLSRDGDLVIAEDFILDAENCAEVGMVELYHYLNQLQRRLKQLNFKKEEFVL
MKAIALVNSDSLHVENHQTLRQLQDTLLQTLSDTVQSTPSNTATTFAFQRCGQLLLTLPL
LRLAAVKAVHFFNTVRQSGKVVLHKLFLEMLDAKL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagtttattaaacagcgatgacaccttatcatcgatgctgttcattaagcaagag
ccttgcagtccgctcgaaagcagcgtcaactttaacagcagctttaactcgtcgctcagc
agtagccctgagagtttgtgttcagacggtggtacatacagccccccaacaatggtccac
ttcggtttccctgcgttgtttccgtccatgccgtcacctggagacatatcgttgcatttc
aacagtaattttaacaacaaccgagcgacttcgtccggcgaagaagatgttttcgaggat
ttcagcagttgtatgacgtcatcagagtcgtgtagcggcgagggtttagccggtttaatg
ccaccgagtctgtctgaatacaagagcgggattgattcctgcgacgctgatagcgtcctc
gccctcgtaccgcctacttcactcgtgctcaaatctccaaccacaagcgaaagtaccggg
acccccgcaccactgtctagcagtagtactccacccaaacgactctgccttgtatgcggg
gatatagcttcaggataccactacggcgttgcttcatgcgaggcttgcaaagcatttttc
aagcgaaccattcaagggagcattgattacacttgtcctgctgccaacgattgcgaaatc
actaaacgccgaagaaaatcttgccaatcttgtcggttttctaaatgcttgagagttgga
atgctcagagaaggtgtgcgattagatcgcgttcgaggtggacggcagaagtacaaacga
aagatagatgccaacgaaatgccttacctggttgcggtgcctgctgccgccgaacctgct
ccaaatgtactttcaccgaacaagattttatcccatctcctcatggctgaaccggataaa
ctgtttgcaccccacgaccattctgccacaagatccgaaatttcaattctaactgcgctt
tgcgaccttgccgatcgtgaattggttgttattataggatgggcaaaacatattccggga
ttcacagtcttgtctttggctgaccaaatggcgctcttgcaatcagcttggatggaagtt
ttagtacttggaatagttttcaggtctctttcacgagacggggaccttgttattgccgaa
gattttattctggacgctgaaaattgtgccgaagtcggaatggtggagttatatcactat
cttaatcaactacaacggcgattgaagcaacttaactttaaaaaggaggaattcgttttg
atgaaggcaattgctcttgtcaattctgactctcttcatgtggaaaaccaccagaccctt
cgacagttgcaagacaccttgctgcaaacgttgtcggacactgtacagtcaaccccgtcg
aatacggctacaacatttgccttccagaggtgtggtcagttgctgctgacacttcccctg
ctgcggttggccgccgttaaagctgtacatttcttcaacactgtcaggcaatctggaaag
gttgttttgcataagcttttccttgaaatgctggacgccaaactgtaa
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