Ciona intestinalis (yellow sea squirt): 778653
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Entry
778653 CDS
T01056
Symbol
irf-like-4
Name
(RefSeq) interferon regulatory factor like protein
KO
K09445
interferon regulatory factor 4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778653 (irf-like-4)
Transcription factors [BR:
cin03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
778653 (irf-like-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
778653
NCBI-ProteinID:
NP_001071743
Ensembl:
ENSCING00000002820
UniProt:
Q4H3B3
LinkDB
All DBs
AA seq
616 aa
AA seq
DB search
MTSPNRDGYYQRPGFPHNDVTSPPRHQVPGSPSSVTSSSSRGEPPKRLRHWLIEMIDSGS
IPGLQWENHEMTIFRIPWKHAGKNNYKEEDCRIFKAWAEHRGKYKPGDKMEAATWKTRLR
CALNKLPDIKELKDRSSLEGNDPYRVYQLLPEADKSQEYEIYPRSTWTKEVVSPDGHRND
PYHMTQPNEPDLTHMTSHTMTQEGIPQVDLTRTTLAPSQEFSRMRVQESDNGSCYTINKL
DIAPPSDYDCVRKSVLRVRSISDDTVGYANPPNPPNHDPRTRSASGVASPSGSDASVHNM
ETYNPYPGRGGYENGVHTSIPPPMVGNHDVAPPAHEMEVYIRYRRSNVLACHVTEPTGCR
ISYGNSSLQLIASATHELPNSVFGPETLQQIELLDCEPYASSETQIQLTKHILNNLRRGL
ILSYSGGCFYAKRLCQSRVFVYGPETSGSAPEKLERNASVKLFDYRKFCENLQQVSQVGK
FRSVEAEIRISFAQTWSVQNPIEKNLVNLYMIPRAAKYLLTKVREKYDTTFTSPEGESIL
TSGPDSYDRLADRATQESNQYVDELIRQMAQSEPMVSFSDINQPTYNPGYFQQCPLQVGP
VSNAGLNDVEMGGCIL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaccaaatcgggatggttactaccaacgaccggggtttccccacaatgacgtc
acttcaccaccccgtcatcaagtcccagggtcgccatcctctgtgacgtcatcaagttca
agaggggagccccctaaacgcttacgtcactggttaatagagatgattgacagcggtagc
atccctgggttgcagtgggagaatcacgagatgacaatatttcggattccatggaaacac
gcggggaagaataattataaagaggaggattgtagaatattcaaggcatgggccgaacac
cgagggaaatacaaacccggtgacaagatggaagccgcgacatggaagacccggttacgt
tgcgccctcaacaaacttcctgatatcaaggaactgaaagacagaagttctttagagggg
aatgatccttacagggtgtaccagttgctgccggaggctgataaaagtcaagaatacgag
atctacccacgaagtacttggacaaaggaggttgtgtcaccagatggccacaggaacgac
ccctatcacatgacgcaacccaacgaaccggatttgacgcacatgacgtcacatacgatg
acgcaagagggaattccccaagtagatctgactcgaacaacactcgctccttcacaggaa
ttcagtagaatgcgagttcaggaatcagacaatgggtcttgttacacaataaacaagttg
gatatagcgccacccagcgactacgattgtgttcgaaagtcggtgcttcgtgttcgctcg
atatcggacgacacagtggggtatgccaacccccctaacccccccaatcatgacccacgt
acaaggagcgcatcaggggttgcatcacctagtggtagcgatgctagcgtgcataacatg
gagacgtacaacccatatcctggaagaggggggtacgagaacggggtccatacatccata
ccgccccctatggtggggaatcatgatgtcgcaccacccgcccatgaaatggaggtttac
attcggtaccgacgttccaatgtcctcgcttgccacgttaccgaaccaacagggtgccgg
atcagttacggcaactccagtttacagttgatagcgagtgcaacccacgaacttcccaac
agtgtgtttggtcctgagacattacagcagattgaactacttgactgcgagccatacgca
tcatcagaaacacagatccaactcaccaaacatatattaaacaaccttagaagaggtcta
atactcagttacagtggaggatgcttctacgccaaacgtctttgtcaaagtcgggtgttt
gtatacggtcccgaaacatcaggcagcgcgccagagaaacttgagcgtaacgcctcagtg
aagttgttcgattatcgaaagttttgtgaaaatcttcagcaagtttcgcaagttggcaag
tttcgctctgtagaggctgagattcgtatttcgtttgcgcaaacttggtcggtgcaaaac
ccgatagagaagaatctggtgaacctttatatgataccacgtgctgccaaatatttgctt
actaaggttcgtgagaaatacgacaccacatttacgtcaccagagggcgaaagtatccta
acatcggggccggatagttacgatagattggcggaccgtgcaacgcaggagtccaaccaa
tatgttgacgaactgattcgacaaatggcacaaagtgagccgatggtcagtttcagcgac
atcaaccaaccaacgtacaaccccgggtactttcaacaatgccccctccaggtggggcca
gtgagcaacgctgggttgaacgacgtagagatgggtggatgcatattgtga
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integrated database retrieval system
