Ciona intestinalis (yellow sea squirt): 778665
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Entry
778665 CDS
T01056
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K09372
LIM homeobox protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778665
Transcription factors [BR:
cin03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
778665
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
ATP-synt_10
FLP26
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
778665
NCBI-ProteinID:
XP_026693626
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MEGPLCSRCNHVISNKFVFQVDGKFWHGDCVVCSDCECPLSNRCYVRNEELFCSDDFCRR
FGKKCGGCGGALYPNDLVHKVGQINSVFHVRCFVCYVCNNNLEPGKPFQANERGLLCKDD
YVAMTSSGDSEEEVWGESNAHVISDVTGVASEVKMTKQLIDEGEAKPGVWENEGGEVSKL
AGFENRHPGQDDEDSLMSQQTKDSSASTAIDTSPPQQGCIAIAATKRRGPRTTIKAKQLE
TLKNAFLSTPKPTRHIREKLAQDTGLSMRVIQVWFQNRRSKERRIKQLNTMVARRQYFDH
VPNIDVTNEQRFYADPHYYPQQQPNYYPTAANFNDSRISPTESETWIHRIDDNHHVYDDI
MYDDVTQSQNGGFPGFAPRTAEGAICEQSGKSIVYWNAA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaaggacctttatgtagcagatgtaaccacgtgatcagcaacaagtttgtatttcag
gtggacgggaaattctggcacggcgattgcgtcgtttgttccgattgtgaatgcccattg
tctaaccgttgttacgtcagaaatgaagaattattttgcagcgacgacttttgtcgtcgc
ttcggtaagaaatgtggggggtgcgggggtgcattgtaccccaacgacctcgtgcacaaa
gtcgggcagataaactccgtgtttcacgttcgatgtttcgtatgctatgtttgcaacaat
aaccttgaacctgggaagccttttcaagctaatgaaagagggctgctctgtaaggatgat
tacgtagcgatgacgtcatcaggagattccgaagaagaagtttggggagaaagtaatgca
cacgtcatcagtgacgtcacaggggtggcatcggaagtgaaaatgacgaaacaattgatc
gacgagggtgaggctaaacctggggtgtgggaaaatgaaggaggcgaagtatcaaagttg
gcggggtttgagaaccgacatcctggccaagatgatgaagattccttgatgtcgcaacaa
acgaaagattcgagcgcgtcgaccgcgattgacacgtcaccaccccaacaaggatgcatc
gcgattgcagcgacgaagcgtcgtggaccgcggacgacgataaaagcaaaacaattggaa
acgctgaaaaatgctttccttagcacccctaaacccacacgtcatatccgggagaagttg
gcgcaagatacaggcctctcgatgcgggtgattcaggtttggttccagaatcgtcgaagc
aaagaaagaagaattaaacaattaaacacgatggtagcgcgacgtcagtactttgatcac
gtgcccaatattgacgtcacaaatgaacaaagattttatgcagatcctcactactaccca
caacaacaacccaactattacccaaccgccgccaacttcaacgacagtagaatctcacca
acagaaagtgaaacctggattcatagaatagatgacaaccatcatgtgtatgatgacatc
atgtatgatgacgtcactcaatctcagaacggggggttccctgggttcgcgccccgaacc
gcggaaggcgcgatttgcgaacaaagcggaaaatctattgtttactggaatgcagcgtga
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integrated database retrieval system
