KEGG   Ciona intestinalis (yellow sea squirt): 778666
Entry
778666            CDS       T01056                                 
Name
(RefSeq) LIM/homeobox protein Lhx9
  KO
K09373  LIM homeobox protein 2/9
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cin03000]
    778666
Transcription factors [BR:cin03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain LIM
    778666
SSDB
Motif
Pfam: LIM Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 778666
NCBI-ProteinID: XP_002124033
LinkDB
Position
9:1220319..1228223
AA seq 402 aa
MQTDICSTQVDANSPALLYTPFFPTSPSNSYEGKFVQKCAGCHQVILDRSYLFVEDSYWH
MGCLKCCACAQPLDNSRTCFVKDTRVYCRNDYKRLFGSQLCTHCGVFIEPHELVMRVHDR
VYHANYKCFSCCSCQRPFTTGQEFVEVAPNLVCMDCCERESSSEYFDINLHKPGRPKKRK
AIMTSSHLDSIGGMAVNYVTEEIRSDTERMNFPPHKSKRMRTSFKHHQLRAMKAYFHQNH
NPDAKDLKQLAQETGLTKRVLQVWFQNARAKYRRGRAQNKTTNQSFTKGSGSDVTKSEND
VTTQQDSNCSDSITSSIGTSPGSDAYLYDVTSSCDDVTDTRSPNFPNTQPPTAQVSPIYP
QPPYSDAQYIGSMTSLSTISTTSALSSTLESVQSAMTSPCSL
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgcaaaccgatatctgctcaacacaagttgatgcaaacagcccagcacttctatatact
ccgttctttcctacttctcccagcaactcgtacgaaggaaagtttgttcaaaagtgcgcc
ggatgccaccaagtaatactggatcgttcatatttattcgtggaggacagttactggcac
atgggatgtctcaaatgctgcgcatgcgcacaacctctcgataattcccgaacatgcttt
gtgaaagacacaagggtgtattgtcgcaacgattacaaaaggttattcggatcacaatta
tgcactcactgcggtgtgtttattgaacctcacgaactcgtgatgcgggttcacgatcgt
gtgtatcacgccaactacaaatgcttttcatgctgttcatgccaacgacctttcacgacg
ggccaggaattcgttgaggttgctccgaacctcgtgtgcatggattgctgcgagagagag
tcgtcttccgagtactttgacatcaacctccacaaaccgggtagaccaaaaaagagaaag
gcaatcatgacgtcatcacacctggattcgatcggaggaatggctgtcaattacgtcaca
gaggagatccgcagcgacaccgagcggatgaattttccgccccataaatcgaagcgcatg
cgcacaagcttcaagcatcaccaactacgagcaatgaaagcttacttccaccaaaatcac
aacccagatgcgaaggatttaaagcagttggctcaagaaactggactgacaaagagagtt
ttacaggtttggtttcagaatgctcgagcaaagtaccgacgaggtcgagcccagaacaaa
acaactaaccagagtttcaccaaaggtagtggtagtgacgtcacgaagtctgaaaatgac
gtcaccactcaacaagattccaactgctctgattcgataacttcgagcattgggacttcc
ccgggctcggacgcatacctttatgacgtcacaagtagctgtgatgacgtgacagacacc
cgctcccctaatttccccaacacacaaccaccaacggcgcaagtgagccctatctacccc
caacccccttactcggatgcccagtatataggctctatgacatcactatccaccatatca
actacgtcagcattgtcatccacgcttgaatcggtccagtcagctatgacctcgccatgc
agtttataa

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