Ciona intestinalis (yellow sea squirt): 778705
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Entry
778705 CDS
T01056
Name
(RefSeq) nuclear transcription factor Y subunit alpha
KO
K08064
nuclear transcription factor Y, alpha
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778705
Transcription factors [BR:
cin03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
778705
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
778705
NCBI-ProteinID:
XP_009858368
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All DBs
Position
4:4413070..4417321
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AA seq
372 aa
AA seq
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MEANMVNTGGTTGSVQAQLVQTTGPNGQPTFQLIAVNGAQGNQQPPQQQQQQQITLQQVQ
TNNIAGNQSQQNFGNTFQLVQTGNGLQLQQSNNTPSQLVIQQPQQQQQQQQQQQQQVQSV
QGNVTQLLLQTDSNNSNSAQLIQIGNNSNLTQSGQQQIVLQPVNNTVNAVSSVLPSNTLN
IANSSSIQNGGGIIMMIPNGSGGFQRMQLAQGASGSSDTLEEEPLYVNAKQYHRILKRRQ
ARAKLEAEGRLPKERKKYLHESRHKHAMMRNRGNGGRFNSGLGKEEEMGSFSQVGHPTTQ
SNINVINPSVYQESSQEQALLKGIMDERTNQSSSPLDVMMQNSGLTLNQLPTTTDTNVVT
LGELYHSTTAND
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggaggccaacatggtcaatactggtggaacaactggttcggttcaagcccagcttgtt
caaactacaggacctaatggacaaccaacatttcagttgattgctgtaaatggagcacaa
ggaaaccaacaaccgccacaacaacaacaacagcaacaaattactttacaacaagttcaa
acgaacaatattgcaggaaatcagtcgcaacaaaactttggtaacacgtttcaactagtt
caaactggtaatggacttcaactgcaacaatctaacaacacaccttctcaattggtaatt
caacaaccacagcaacaacaacaacaacaacagcagcagcaacaacaagttcaatctgta
caaggcaatgtcacccaactattattgcaaactgacagcaataattccaactctgcccag
cttattcagattggaaataactcgaatctcacacaaagcgggcaacaacagattgtatta
caacctgtaaacaacacagttaatgctgtttcatctgtgttaccttccaataccttaaac
attgctaactcaagctcaatacaaaatggtggaggaataattatgatgatcccaaatgga
agtggtgggtttcaaagaatgcagttagcgcaaggtgcctctggtagtagtgacacatta
gaggaagaaccattgtatgtaaacgcaaagcaataccatcgtatactgaagaggagacag
gcaagagctaaactagaagcagaaggaagacttccaaaagaaagaaaaaaataccttcac
gagtcccgacacaagcatgccatgatgaggaatcgaggaaatggtggaaggtttaactcc
gggcttgggaaggaagaagaaatgggttccttttcacaagttggtcaccccaccacacag
agcaatataaatgtcatcaatccatcagtttaccaagaaagtagccaagaacaagcttta
ttaaaaggaattatggatgaaaggactaatcaaagtagttctccactggatgttatgatg
caaaactctggccttactttaaatcaactccctaccacaaccgatactaatgtggtgact
ttaggggagttataccactccactactgccaatgattaa
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