Ciona intestinalis (yellow sea squirt): 778714
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Entry
778714 CDS
T01056
Name
(RefSeq) transcription factor protein
KO
K09402
forkhead box protein J1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
778714
Transcription factors [BR:
cin03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix tissue-specific regulators
778714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Forkhead
Motif
Other DBs
NCBI-GeneID:
778714
NCBI-ProteinID:
NP_001071788
Ensembl:
ENSCING00000015262
UniProt:
Q4H318
LinkDB
All DBs
AA seq
453 aa
AA seq
DB search
MNNAVRKKLRRSEIHERLKQNYEALYARCPPLGPNKEMLDDSLTNLQWLWNLNVSMTFPI
EINKGEKNGKPAKQQARQEHEASPSKPQCEKYFNQSQRRKISQTTWKQTKQIEKREKHPV
MGNGSKFEKPAYSVAQLICMAIENSKHKKLSLSAICKWIRDNFAYYRNIEESLQNSVRLC
LVGNGYFQKSSPNEASNKYLWEIKPKIYFGRPIFSQGGSKDMTPPNLPITNVDFLDSASN
RKRKQVAPQKVIRRKNTKKRRNINENSSPVSPNLLEEEAPELGSLKGDFNWNSILDGLFP
TSPGDLSLSANEEKVCNEFLTKHDGSMFAHNGFNDNVNKENGDNGLLPHLHEQCGDGYFP
FTDTSTEETKYFKEFLDEKNELDLTVTGHQIEIPSEWEPVTSTLNDILCEKQDDNVAGFS
QTQAIQQTDKTNHPWQEVENATDVIEDILMSTF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgctgtaagaaaaaagttaagacgctctgaaatacacgagcgtctaaaacaa
aattatgaagctttatacgcaagatgtcccccattgggtccaaacaaagaaatgttggat
gatagtttgacgaacctgcagtggttgtggaatctaaatgtcagtatgacgtttccaatt
gaaattaacaagggagagaaaaatggtaaaccagccaagcaacaagctcgacaggagcat
gaggcaagcccctctaaaccgcaatgtgaaaaatatttcaaccaatcacagaggagaaaa
atttcgcaaacaacttggaaacaaacaaaacaaattgaaaagagagaaaaacacccggta
atggggaacgggtcgaagtttgagaagcctgcttattctgtagcgcaacttatctgcatg
gctattgaaaactcaaagcataaaaaattaagtttatcggcaatttgcaagtggatccga
gataattttgcttactacaggaatatagaagaatcacttcagaattctgttcgattgtgt
ttggttggtaatggatacttccaaaaatcatcaccaaacgaagcaagcaacaaatatctt
tgggaaattaaaccaaagatatattttggtcgtcctatcttttcacagggtggtagcaaa
gatatgaccccacccaacctcccaataaccaacgttgactttcttgattcagcctccaat
cggaaaaggaagcaagttgctccacagaaggttatacgaagaaaaaacacaaaaaagcgt
cgaaacatcaatgaaaatagttctccggtttccccaaatttgttggaggaagaagcacca
gagcttggttcgttgaaaggagattttaattggaattcaattcttgacggattgtttcca
acgtcacccggagatttaagtttgtcggcaaacgaggaaaaagtttgcaacgaatttctc
accaaacacgacggatcaatgtttgctcacaatggattcaatgacaatgtaaacaaagag
aacggagacaatggattgttgccacaccttcatgaacaatgtggggatgggtacttcccc
tttactgatacaagcacagaagaaacaaaatatttcaaagaatttcttgatgagaaaaat
gagcttgatctgacagtgacgggccaccagattgagattccgagtgagtgggaacccgtc
acttcaacattaaacgatatcttgtgtgaaaaacaagatgataatgtggctggttttagc
caaacacaagcaatccaacaaactgataaaaccaaccatccatggcaagaagtggaaaac
gcaaccgacgttattgaggatattctaatgtcaacattttaa
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