Ciona intestinalis (yellow sea squirt): 778723
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Entry
778723 CDS
T01056
Name
(RefSeq) Wnt signaling ligand
KO
K00445
wingless-type MMTV integration site family, member 6
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04150
mTOR signaling pathway
cin04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
778723
04150 mTOR signaling pathway
778723
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cin00536
]
778723
Glycosaminoglycan binding proteins [BR:
cin00536
]
Heparan sulfate / Heparin
Morphogens
778723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
wnt
Motif
Other DBs
NCBI-GeneID:
778723
NCBI-ProteinID:
NP_001071795
Ensembl:
ENSCING00000010055
UniProt:
Q4H305
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Position
9:complement(4415017..4424416)
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AA seq
608 aa
AA seq
DB search
MTLQRSCFVDLSEKRDMSDVGGATYDEEALSVSEMLSSHMDVSRATELSQSMASERLSPT
ESPITACCSADQTGIFSCTFCRKPLRAANTIRRSKLRSRNLDDCGTTPHESTAVTSTDRS
DNELEMRLGQNRSRNSEHSEAVMQNDSDIPNLSSENLCRKHRRNSVERGVTKQSTWRVHR
RILPAIHSSVTIVLLQVLLFCTVNVAAVWWNPGYRPTLMDSERICLWAQQIGGPQAEMCA
NEMPVVEEIKKGIQRGAYNCAREFRYSRWNCSQTPKKFYEKALWQTTKETSYLQAVTSAA
MTFAITEACSLGNIPECGCVNTRGQKREYLRREAQKRNYYINESYLDTFVDQFDWEGCDD
NVDFAYRKTRHFLNFTRFIGRKRKINLRLRMSAHNYEAGRLAITEKMAEKCKCHGFSGTC
TIRTCWMRMPKFDAVRATLRRMYNTATKVNLQPGTRRLVIARRPRRPSSRHRNTASRRTN
KVKRGLRKNIPTRFRSRNRKAKNPRRRIRLKNRLRRRLYPVASKHLVYHQPSPNFCRRDK
RKGSLGTKGRVCDPTRREGYGSCQYMCCGRGYTTEVVEHTMKCNCTFIYCCTMTCDECIN
RYTRYVCR
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgcagaggtcttgttttgtggatttgtctgaaaaacgagatatgtcagacgtg
ggtggcgctacttatgacgaagaagcattatctgtttcggaaatgctaagcagccacatg
gacgtatctcgagcaacggaactaagccagtcaatggcaagcgaaagactttctccaact
gaatcgcccatcactgcttgttgcagtgcggaccagaccggaatatttagctgtacattt
tgtagaaagcctcttcgggcagctaacacgatccgacgatccaagttgagatctcggaac
ctcgacgactgtggcacaacgccacacgaaagtactgctgtaactagtacagacaggagt
gacaacgaattagaaatgagactagggcaaaatcggtcaagaaattcggaacactcggaa
gcggtcatgcaaaatgacagtgacatacctaacttgtcaagcgaaaatttatgccggaaa
caccgacgaaattccgtggagcggggagttaccaaacaatccacgtggcgtgtgcaccga
cgaatacttcccgccattcattcaagcgtgacgatagttctgcttcaagtgcttttgttc
tgtacagtcaacgtcgccgctgtgtggtggaatcctggatatcgaccaacacttatggac
agcgagagaatctgtctttgggctcaacaaatcggaggaccccaggcggaaatgtgcgcc
aacgaaatgcctgtagttgaagagattaagaagggaattcaaaggggtgcttacaactgt
gcgcgggaattccgctattcgagatggaactgctcgcaaaccccgaaaaaattctacgaa
aaagctctttggcaaacaacgaaggaaaccagctaccttcaagcggtgacgtcagcagct
atgacgtttgccataacggaggcgtgcagccttggcaacatacccgaatgcggctgtgtc
aacacacgcggacagaagagggaatacctcagaagggaagcccaaaagcgcaactattac
ataaacgaaagctacctcgacactttcgttgaccaattcgactgggaaggttgtgatgac
aacgtggactttgcttaccggaagacaaggcattttctcaacttcacgcggtttattgga
cggaagcgaaagattaatcttcgattgcgaatgagcgctcataattatgaagccggccgc
ctggcgatcactgagaagatggctgaaaagtgcaaatgccacggattctctggcacgtgc
actattcgcacttgctggatgcgaatgccaaagtttgacgctgtgcgggcgacgttacgc
cggatgtataacactgcgaccaaagtcaaccttcagcccgggactaggaggcttgtcatc
gccaggagaccacggcgtccttcgtctcgacacagaaacacagcatctagaagaacgaac
aaagtaaaaagaggactgcggaaaaacatcccgactcgttttcggtctcgaaaccgtaaa
gccaaaaatcctcgtcggcgtattcgtttaaagaatcggttgcgaagacgcctttacccc
gtcgcaagcaagcatttagtctaccaccagccatcgccgaacttctgccggcgagacaaa
cgtaaaggcagtctaggtaccaaaggtcgcgtgtgcgatccgactcgacgggaagggtac
ggaagctgtcagtacatgtgctgcggccgcggctatacgactgaggtagtcgaacacaca
atgaaatgtaactgtactttcatctactgctgcactatgacatgcgacgaatgtataaac
cggtacacacgatacgtttgcagataa
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